Welcome to the Genome Database for Rosaceae
The Genome Database for Rosaceae (GDR) is a curated and integrated web-based relational database providing centralized access to Rosaceae genomics and genetics data and analysis tools to facilitate cross-species utilization of data. Supported by the NSF Plant Genome Program from 2003 to 2008, GDR is now funded until 2013 by the USDA Specialty Crop Research Initiative. As part of tree fruit Genome Database Resources (tfGDR), GDR will be expanded to include whole genome sequences and annotations for apple, peach, and strawberry, transcript data, metacyc pathways, large scale phenotype and genotype data, breeding data, controlled vocabularies, and new analysis tools, all of which will be implemented within the open source infrastructure of drupal and chado (tripal).
What's new in GDR?
- The strawberry genome v1.0 (build 8). View and download the genome sequence, predicted genes, homologs and more. Additionally, blast your sequences against this assembly.
- SNP markers included in the apple 9K, IRSC peach 9K, UC Davis peach 6K, and cherry 6K illumina SNP arrays available to download in excel and view in GBrowse. Additionally 2.1 million candidate SNPs for apple are also available.
- The apple genome v1.0. View and download the genome sequence, predicted genes, homologs, markers and blast your sequences.
- The peach genome v1.0. View and download the predicted genes, genome sequences, putative protein and EST homologs, Rosceae genera mapped transcripts, mapped markers, and blast your sequences against the datasets.
- Report a problem | Ask us a question | Post a job | Post a meeting or event | What's been fixed in GDR? | What are we working on? | Used GDR data or tools in your research? how to reference us
