Welcome to the Genome Database for Rosaceae
The Genome Database for Rosaceae (GDR) is a curated and integrated web-based relational database providing centralized access to Rosaceae genomics and genetics data and analysis tools to facilitate cross-species utilization of data. Supported by the NSF Plant Genome Program from 2003 to 2008, GDR is now funded until 2013 by the USDA Specialty Crop Research Initiative. As part of tree fruit Genome Database Resources (tfGDR), GDR will be expanded to include whole genome sequences and annotations for apple, peach, and strawberry, transcript data, metacyc pathways, large scale phenotype and genotype data, breeding data, controlled vocabularies, and new analysis tools, all of which will be implemented within the open source infrastructure of drupal and chado (tripal).
Whats new in GDR?
- The peach genome v1.0. View and download the predicted genes, genome sequences, putative protein and EST homologs, Rosceae genera mapped transcripts, mapped markers, and blast your sequences against the datasets.
- Five new maps are available in CMap for prunus, almond and apple.
- GDR redesigned in Drupal. Any problems/comments? Please let us know!
- Batch BLAST server implemented, compare batches of sequences against available databases and get parsed results in excel.
- Report a problem | Ask us a question | Post a job | Post a meeting or event | What's been fixed in GDR? | What are we working on? | Used GDR data or tools in your research? how to reference us.
