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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Almond-Almond-FT-F1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps G6T
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Anchored_EST_by_BAC
Anchored_EST_by_BAC_contig
Isozyme
RAPD
RFLP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Almond - Almond-FT-F1 [ View Map Set Info ]
Map Name: G6T
Map Start: 0.00 cM
Map Stop: 37.00 cM
Features by Type:
1 SSR
1 Anchored_EST_by_BAC_contig
4 RFLP
1 RAPD
1 Isozyme
1 Anchored_EST_by_BAC
9 Total

Map Features

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Items 1 to 9 of 9.
Almond - Almond-FT-F1 - G6T
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PS7a2 SSR 0.00 Almond - Almond-FT-F1 - G6F PS7a2 SSR 22.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G6 PS7a2 SSR 7.00 (cM) Automated name-based View Maps
AG13 RFLP 0.00 Almond - Almond-FT-F1 - G6F AG13 RFLP 22.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G6 AG13 RFLP 7.00 (cM) Automated name-based View Maps
Prunus - Prunus-GN-F2 - G6 AG13 RFLP 0.00 (cM) Automated name-based View Maps
AG54A RFLP 0.00 Prunus - Prunus-TE-F2 - G6 AG54 RFLP 7.00 (cM) Automated name-based View Maps
Sdh-1 Isozyme 14.00 Almond - Almond-FT-F1 - G6F Sdh-1 Isozyme 32.00 (cM) Automated name-based View Maps
PP_LEa0037K21f Anchored_EST_by_BAC 20.00 Prunus - Prunus-TE-F2 - G1 PP_LEa0037K21f Anchored_EST_by_BAC 78.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G8 PP_LEa0037K21f Anchored_EST_by_BAC 30.80 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G8T PP_LEa0037K21f Anchored_EST_by_BAC 27.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G8F PP_LEa0037K21f Anchored_EST_by_BAC 33.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G6F PP_LEa0037K21f Anchored_EST_by_BAC 45.00 (cM) Automated name-based View Maps
TubA1 RFLP 20.00 Prunus - Prunus-TE-F2 - G8 TubA1 RFLP 30.80 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G8T TubA2 RFLP 27.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G8F TubA2 RFLP 33.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G6F TubA1 RFLP 45.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 TubA3 RFLP 78.00 (cM) Automated name-based View Maps
PP_LEa0006J17f Anchored_EST_by_BAC_contig 20.00 Almond - Almond-FT-F1 - G8F PP_LEa0006J17f Anchored_EST_by_BAC_contig 33.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G8 PP_LEa0006J17f Anchored_EST_by_BAC_contig 30.80 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G6 PP_LEa0006J17f Anchored_EST_by_BAC_contig 8.70 (cM) Automated name-based View Maps
Peach - Peach-JF-F2 - G6 PP_LEa0006J17f Anchored_EST_by_BAC_contig 11.70 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 PP_LEa0006J17f Anchored_EST_by_BAC_contig 78.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G8T PP_LEa0006J17f Anchored_EST_by_BAC_contig 27.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G6F PP_LEa0006J17f Anchored_EST_by_BAC_contig 45.00 (cM) Automated name-based View Maps
AG27B RFLP 30.00 Almond - Almond-FB-F1 - G6F AG27 RFLP 31.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G7F AG27C RFLP 25.00 (cM) Automated name-based View Maps
OPL11A RAPD 37.00 Almond - Almond-FT-F1 - G3F OPL11C RAPD 7.00 (cM) Automated name-based View Maps
Almond - Almond-FT-F1 - G6F OPL11B RAPD 37.00 (cM) Automated name-based View Maps