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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-apple integrated map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple Integrated Map [ View Map Set Info ]
Map Name: 2
Map Start: 0.00 cM
Map Stop: 85.40 cM
Features by Type:
125 SNP
14 SSR
1 Gene
140 Total

Map Features

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Items 1 to 25 of 140.       of 6 | Next
Apple - Apple Integrated Map - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GDsnp00348 SNP 0.00 No other positions
snpEB156780 SNP 0.70 No other positions
GDsnp01134 SNP 1.20 No other positions
GDsnp00856 SNP 1.20 No other positions
GDsnp00408 SNP 1.20 No other positions
GDsnp02026 SNP 1.70 No other positions
snpCO903605 SNP 2.40 No other positions
CN581493-ssr SSR 2.40 Apple - Apple-FD-F1 - D2 CN581493-SSR SSR 3.80 (cM) Automated name-based View Maps
GDsnp01557 SNP 2.60 No other positions
GDsnp01735 SNP 3.70 No other positions
GDsnp00446 SNP 3.70 No other positions
GDsnp01565 SNP 4.30 No other positions
GDsnp00959 SNP 5.00 No other positions
CH02f06 SSR 5.70 Apple - Apple-FD-F1 - F2 CH02f06 SSR 1.50 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D2 CH02f06 SSR 0.70 (cM) Automated name-based View Maps
GDsnp00035 SNP 7.50 No other positions
GDsnp01641 SNP 7.80 No other positions
GDsnp01476 SNP 8.50 No other positions
GDsnp00203 SNP 9.30 No other positions
CH02c02a SSR 9.30 Apple - Apple-FD-F1 - D2 CH02c02a SSR 6.00 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F2 CH02c02a SSR 5.50 (cM) Automated name-based View Maps
GDsnp01945 SNP 10.60 No other positions
GDsnp00799 SNP 12.80 No other positions
GDsnp00112 SNP 13.20 No other positions
GDsnp00927 SNP 13.40 No other positions
GDsnp00077 SNP 13.70 No other positions
GDsnp01105 SNP 14.00 No other positions