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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-apple integrated map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple Integrated Map [ View Map Set Info ]
Map Name: 1
Map Start: 0.00 cM
Map Stop: 89.60 cM
Features by Type:
84 SNP
9 SSR
2 Gene
95 Total

Map Features

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Items 1 to 25 of 95.       of 4 | Next
Apple - Apple Integrated Map - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GDsnp00288 SNP 0.00 No other positions
GDsnp02894 SNP 1.50 No other positions
GDsnp02886 SNP 1.50 No other positions
GDsnp02484 SNP 1.50 No other positions
GDsnp02459 SNP 1.50 No other positions
CH03g12z SSR 1.50 Apple - Apple-FD-F1 - D1 CH03g12z SSR 4.20 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F1 CH03g12z SSR 2.40 (cM) Automated name-based View Maps
GDsnp00370 SNP 1.90 No other positions
GDsnp02771 SNP 2.30 No other positions
Hi21g05x SSR 2.50 Apple - Apple-FD-F1 - D1 Hi21g05x SSR 7.80 (cM) Automated name-based View Maps
GDsnp00014 SNP 2.50 No other positions
GDsnp02772 SNP 2.90 No other positions
GDsnp01826 SNP 3.20 No other positions
GDsnp00721 SNP 3.60 No other positions
GDsnp00152 SNP 4.10 No other positions
GDsnp02428 SNP 5.30 No other positions
GDsnp02580 SNP 7.40 No other positions
GDsnp02325 SNP 7.40 No other positions
GDsnp01351 SNP 8.40 No other positions
GDsnp01815 SNP 10.30 No other positions
GDsnp00533 SNP 10.60 No other positions
GDsnp02513 SNP 10.80 No other positions
GDsnp00420 SNP 11.20 No other positions
GDsnp02334 SNP 12.20 No other positions
GDsnp00026 SNP 12.20 No other positions
GDsnp01494 SNP 13.90 No other positions