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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-apple integrated map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 3
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple Integrated Map [ View Map Set Info ]
Map Name: 3
Map Start: 0.00 cM
Map Stop: 89.10 cM
Features by Type:
104 SNP
9 SSR
1 Gene
114 Total

Map Features

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Items 1 to 25 of 114.       of 5 | Next
Apple - Apple Integrated Map - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GDsnp00506 SNP 0.00 No other positions
GDsnp00866 SNP 8.30 No other positions
GDsnp00322 SNP 8.30 No other positions
GDsnp00754 SNP 8.70 No other positions
GDsnp00312 SNP 8.70 No other positions
GDsnp00085 SNP 8.70 No other positions
CH03e03 SSR 8.70 Apple - Apple-FD-F1 - F3 CH03e03 SSR 0.00 (cM) Automated name-based View Maps
Apple - Apple-M9R5-F1 - LG3 ch03e03 SSR 0.00 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D3a CH03e03 SSR 3.20 (cM) Automated name-based View Maps
GDsnp00480 SNP 11.30 No other positions
GDsnp00078 SNP 12.50 No other positions
GDsnp00588 SNP 13.90 No other positions
GDsnp02300 SNP 14.20 No other positions
GDsnp01645 SNP 14.30 No other positions
GDsnp01482 SNP 15.50 No other positions
GDsnp00836 SNP 15.50 No other positions
Prx_3 Gene 15.80 No other positions
GDsnp01851 SNP 16.30 No other positions
GDsnp00124 SNP 16.30 No other positions
GDsnp00539 SNP 16.80 No other positions
GDsnp00276 SNP 17.20 No other positions
GDsnp01957 SNP 18.30 No other positions
GDsnp00882 SNP 18.30 No other positions
GDsnp00477 SNP 18.30 No other positions
GDsnp01263 SNP 18.90 No other positions
GDsnp02304 SNP 21.30 No other positions
GDsnp00073 SNP 21.70 No other positions