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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-apple integrated map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple Integrated Map [ View Map Set Info ]
Map Name: 9
Map Start: 0.00 cM
Map Stop: 73.30 cM
Features by Type:
107 SNP
1 Gene
10 SSR
118 Total

Map Features

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Items 1 to 25 of 118.       of 5 | Next
Apple - Apple Integrated Map - 9
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GDsnp01386 SNP 0.00 No other positions
GDsnp00463 SNP 0.40 No other positions
GDsnp00885 SNP 0.60 No other positions
GDsnp01891 SNP 0.80 No other positions
GDsnp01189 SNP 1.30 No other positions
GDsnp01723 SNP 1.50 No other positions
GDsnp01204 SNP 2.30 No other positions
GDsnp01328 SNP 2.80 No other positions
GDsnp02564 SNP 3.30 No other positions
GDsnp01332 SNP 3.30 No other positions
Fdh_2 Gene 3.30 No other positions
GDsnp02099 SNP 3.80 No other positions
GDsnp02013 SNP 3.80 No other positions
GDsnp01646 SNP 3.80 No other positions
GDsnp01339 SNP 5.40 No other positions
GDsnp00096 SNP 5.40 No other positions
GDsnp00169 SNP 5.90 No other positions
GDsnp01573 SNP 8.20 No other positions
GDsnp00657 SNP 8.20 No other positions
GDsnp02134 SNP 9.60 No other positions
GDsnp01948 SNP 9.60 No other positions
GDsnp01771 SNP 9.60 No other positions
GDsnp00108 SNP 9.60 No other positions
GDsnp00679 SNP 11.10 No other positions
GDsnp00298 SNP 11.10 No other positions