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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-apple integrated map
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 16
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple Integrated Map [ View Map Set Info ]
Map Name: 16
Map Start: 0.00 cM
Map Stop: 58.30 cM
Features by Type:
13 SSR
65 SNP
78 Total

Map Features

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Items 1 to 25 of 78.       of 4 | Next
Apple - Apple Integrated Map - 16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CH02a03 SSR 0.00 Apple - Apple-M9R5-F1 - LG16 CH02a03 SSR 6.24 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D16 CH02a03 SSR 7.80 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F16 CH02a03 SSR 6.30 (cM) Automated name-based View Maps
GDsnp01588 SNP 2.40 No other positions
CH05a09 SSR 2.40 Apple - Apple-FD-F1 - D16 CH05a09 SSR 10.90 (cM) Automated name-based View Maps
GDsnp00826 SNP 2.90 No other positions
GDsnp01600 SNP 4.00 No other positions
CH02d10a SSR 4.70 Apple - Apple-FD-F1 - D16 CH02d10a SSR 0.00 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F16 CH02d10a SSR 0.00 (cM) Automated name-based View Maps
Hi22f06 SSR 5.60 Apple - Apple-M9R5-F1 - LG16 Hi22f06 SSR 18.45 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D16 Hi22f06 SSR 12.10 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F16 Hi22f06 SSR 7.00 (cM) Automated name-based View Maps
GDsnp01734 SNP 5.60 No other positions
GDsnp00292 SNP 5.80 No other positions
GDsnp00269 SNP 5.90 No other positions
GDsnp00047 SNP 7.10 No other positions
CH05c06 SSR 7.40 Apple - Apple-FD-F1 - F16 CH05c06 SSR 11.10 (cM) Automated name-based View Maps
Apple - Apple-M9R5-F1 - LG16 CH05c06 SSR 19.47 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D16 CH05c06 SSR 14.40 (cM) Automated name-based View Maps
CH05e04 SSR 7.40 No other positions
Hi04c10p-4 SSR 7.40 No other positions
snpMdBHLH21 SNP 7.60 No other positions
GDsnp00923 SNP 7.70 No other positions
GDsnp00993 SNP 8.10 No other positions
GDsnp00719 SNP 8.40 No other positions
GDsnp20004 SNP 8.40 No other positions
GDsnp01943 SNP 9.70 No other positions
GDsnp00200 SNP 11.60 No other positions
GDsnp01116 SNP 12.00 No other positions
GDsnp00196 SNP 12.00 No other positions
GDsnp01331 SNP 12.40 No other positions
GDsnp20002 SNP 12.40 No other positions