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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Pear-Kinchaku1b
(Reference Set) 		Apple-Apple-M9R5-F1
Min.
Correspondences
Align Vertically
Stack
Maps Kin1b LG1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Mendelian_Trait_Loci
SSR
STS
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pear - Pear-Kin1b-F1 [ View Map Set Info ]
Map Name: Kin1b
Map Start: 0.00 cM
Map Stop: 36.30 cM
Features by Type:
3 SSR
5 STS
1 Mendelian_Trait_Loci
9 Total

Map Features

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Items 1 to 9 of 9.
Pear - Pear-Kin1b-F1 - Kin1b
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
STS-OPW2 STS 0.00 Pear - Kinchaku1a - Kin1a STS-OPW2 STS 16.10 (cM) Automated name-based View Maps
Vnk Mendelian_Trait_Loci 7.00 Pear - Kinchaku1a - Kin1a Vnk Mendelian_Trait_Loci 25.80 (cM) Automated name-based View Maps
STS-OPAW13 STS 11.40 Pear - Kinchaku1a - Kin1a STS-OPAW13 STS 29.90 (cM) Automated name-based View Maps
STS-OPO9 STS 11.80 Pear - Kinchaku1a - Kin1a STS-OPO9 STS 29.10 (cM) Automated name-based View Maps
STS-CT/CTA STS 11.80 Pear - Kinchaku1a - Kin1a STS-CT/CTA STS 28.20 (cM) Automated name-based View Maps
Hi02c07 SSR 13.10 Apple - Apple-M9R5-F1 - LG1 Hi02c07 SSR 0.00 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F1 Hi02c07 SSR 23.10 (cM) Automated name-based View Maps
STS-OPAQ11 STS 19.40 No other positions
AG04 SSR 36.30 Apple - Apple-FD-F1 - D1 AG04 SSR 53.80 (cM) Automated name-based View Maps
CH-Vf2 SSR 36.30 Pear - Kinchaku1a - Kin1a CH-Vf2 SSR 58.80 (cM) Automated name-based View Maps