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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Sweet Cherry-EF x NY54 2008
(Reference Set)
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Correspondences
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Maps EF6
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 Feature Options
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
dCAP
EST-SSR
Indel
SRAP (Sequence-Related Amplified Polymorphism)
SSR
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sweet Cherry - Sweet Cherry-EFxNY-F1-2008 [ View Map Set Info ]
Map Name: EF6
Map Start: 0.00 cM
Map Stop: 75.69 cM
Features by Type:
1 SRAP (Sequence-Related Amplified Polymorphism)
9 SSR
6 AFLP
2 dCAP
2 Indel
2 EST-SSR
22 Total

Map Features

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Items 1 to 22 of 22.
Sweet Cherry - Sweet Cherry-EFxNY-F1-2008 - EF6
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
me1-em2-575 SRAP (Sequence-Related Amplified Polymorphism) 0.00 No other positions
EMPaS01 SSR 2.42 Sweet Cherry - EF x NY54 2008 - NY6 EMPaS01 SSR 14.82 (cM) Automated name-based View Maps
UDP96-001 SSR 6.97 Peach - Peach-DG-F1-2009 - G6 UDP96-001 SSR 30.90 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G6 UDP96-001 SSR 29.50 (cM) Automated name-based View Maps
Sweet Cherry - EF x NY54 2008 - NY6 UDP96-001 SSR 11.97 (cM) Automated name-based View Maps
Peach - Peach-GN-F2 - G6A UDP-001 SSR 0.00 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G6D UDP96-001 SSR 12.00 (cM) Automated name-based View Maps
Almond - Almond-RD-F1 - G6 UDP96-001 SSR 12.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN6 UDP96-001 SSR 22.10 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G6 UDP96-001 SSR 17.50 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G6R UDP96-001 SSR 18.10 (cM) Automated name-based View Maps
Peach - Peach-PF-BC1 - G6 UDP-001 SSR 12.00 (cM) Automated name-based View Maps
EAT-MCTC-375 AFLP 13.66 No other positions
BPPCT008 SSR 19.73 Peach - Peach-PR-F2 - G6 BPPCT008 SSR 30.80 (cM) Automated name-based View Maps
Almond - Almond-RD-F1 - G6 BPPCT008 SSR 22.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - P2175G6 BPPCT008 SSR 0.00 (cM) Automated name-based View Maps
Prunus - Prunus Bin Map - G6 BPPCT008 SSR 30.10 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G6R BPPCT008 SSR 33.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN6 BPPCT008 SSR 40.90 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G6D BPPCT008 SSR 29.80 (cM) Automated name-based View Maps
Peach - Peach-GN-F2 - G6A BPPCT008 SSR 1.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G6 BPPCT008 SSR 30.10 (cM) Automated name-based View Maps
MA014a SSR 22.86 Peach - Peach-JF-F2 - G6 MA014a SSR 85.20 (cM) Automated name-based View Maps
PR127 dCAP 26.42 No other positions
EAA-MCCC-160 AFLP 27.88 No other positions
EAC-MCTA-225 AFLP 30.23 No other positions
EMPA004 SSR 30.76 Almond - Almond-NL-F1-2010 - G6 EMPA004 SSR 27.99 (cM) Automated name-based View Maps
CPPCT029 SSR 32.37 Almond - Almond-NL-F1-2010 - G1 CPPCT029 SSR 91.02 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN1 CPPCT029 SSR 127.90 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G1 CPPCT029 SSR 65.10 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 CPPCT029 SSR 65.10 (cM) Automated name-based View Maps
EAT-MCTC-272 AFLP 38.63 No other positions
CPSCT029 SSR 39.40 Sweet Cherry - EF x NY54 2008 - NY6 CPSCT029 SSR 36.18 (cM) Automated name-based View Maps
EPPCU2828 EST-SSR 44.48 No other positions
EPPCU3090 EST-SSR 49.87 Sweet Cherry - EF x NY54 2008 - NY6 EPPCU3090 EST-SSR 59.52 (cM) Automated name-based View Maps
EAT-MCCC-100 AFLP 55.81 No other positions
UDP98-021 SSR 56.36 Peach - Peach-JF-F2 - G6 UDP98-021 SSR 73.20 (cM) Automated name-based View Maps
Almond - Almond-RD-F1 - G6 UDP98-021 SSR 46.00 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G6D UDP98-021 SSR 69.50 (cM) Automated name-based View Maps
MA040a SSR 63.54 Peach - Peach-JF-F2 - G6 MA040a SSR 84.90 (cM) Automated name-based View Maps
Peach - Peach-PR-F2 - G6 MA040a SSR 64.30 (cM) Automated name-based View Maps
Sweet Cherry - EF x NY54 2008 - NY6 MA040a SSR 76.89 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G6 MA040a SSR 71.50 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - P2175G6 MA040a SSR 65.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN3 MA040a SSR 7.40 (cM) Automated name-based View Maps
PrpFT Indel 68.05 No other positions
EAC-MCTA-350 AFLP 69.76 No other positions
Si Indel 72.00 Sweet Cherry - EF x NY54 2008 - NY6 Si Indel 84.13 (cM) Automated name-based View Maps
PR121 dCAP 75.69 No other positions