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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Sweet Cherry-EF x NY54 2008
(Reference Set) 		Peach-Peach-AJ-F2-2005
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Correspondences
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Maps NY8 G6
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
dCAP
ISSR
Mendelian_Trait_Loci
RAPD
SCAR
SRAP (Sequence-Related Amplified Polymorphism)
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Sweet Cherry - Sweet Cherry-EFxNY-F1-2008 [ View Map Set Info ]
Map Name: NY8
Map Start: 0.00 cM
Map Stop: 86.73 cM
Features by Type:
4 SSR
6 AFLP
2 SRAP (Sequence-Related Amplified Polymorphism)
1 dCAP
13 Total

Map Features

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Items 1 to 13 of 13.
Sweet Cherry - Sweet Cherry-EFxNY-F1-2008 - NY8
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MA023aB SSR 0.00 Peach - Peach-PR-F2 - G8 MA023a SSR 7.40 (cM) Automated name-based View Maps
Sweet Cherry - EF x NY54 2008 - EF8 MA023aB SSR 9.19 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G6 MA023a SSR 48.00 (cM) Automated name-based View Maps
EAT-MCTC-188 AFLP 7.37 No other positions
EAA-MCCC-425 AFLP 8.04 No other positions
EAT-MCTC-315 AFLP 15.31 No other positions
MD201a SSR 22.21 Peach - Peach-AJ-F2-2005 - G8 MD201a SSR 17.30 (cM) Automated name-based View Maps
EAT-MCTC-330 AFLP 26.05 No other positions
PR27 dCAP 34.97 No other positions
CPPCT006 SSR 40.84 Peach - Peach-PR-F2 - G8 CPPCT006 SSR 26.20 (cM) Automated name-based View Maps
Almond - Almond-RD-F1 - G8 CPPCT006 SSR 14.00 (cM) Automated name-based View Maps
Almond - Almond-NL-F1-2010 - G8 CPPCT006 SSR 30.07 (cM) Automated name-based View Maps
Sweet Cherry - EF x NY54 2008 - EF8 CPPCT006 SSR 35.43 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G8R CPPCT006 SSR 16.10 (cM) Automated name-based View Maps
Peach - Peach-PF-BC1 - G8 CPPCT006 SSR 35.40 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G8 CPPCT006 SSR 24.80 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G8D CPPCT006 SSR 19.20 (cM) Automated name-based View Maps
Peach - Peach-DG-F1-2009 - G6 cppct006-a SSR 38.40 (cM) Automated name-based View Maps
Peach - Peach-DG-F1-2009 - G8 CPPCT006 SSR 29.00 (cM) Automated name-based View Maps
me1-em2-475 SRAP (Sequence-Related Amplified Polymorphism) 43.05 No other positions
PS1h3 SSR 52.18 Peach - Peach-GN-F2 - G8 PS1h3 SSR 0.00 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G8 PS1h3 SSR 31.60 (cM) Automated name-based View Maps
Almond - Almond-RD-F1 - G8 PS01H03 SSR 18.00 (cM) Automated name-based View Maps
EAA-MCCT-345 AFLP 68.85 No other positions
EAT-MCTC-510 AFLP 76.08 No other positions
me1-em2-570 SRAP (Sequence-Related Amplified Polymorphism) 86.73 No other positions