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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Apple-Apple-M9R5-F1
(Reference Set) 		Pear-Pear-Bartlett
Min.
Correspondences
Align Vertically
Stack
Maps LG7 Ba7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Apple - Apple-M9R5-F1 [ View Map Set Info ]
Map Name: LG7
Map Start: 0.00 cM
Map Stop: 56.06 cM
Features by Type:
5 SSR
5 Total

Map Features

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Items 1 to 5 of 5.
Apple - Apple-M9R5-F1 - LG7
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Hi05b09 SSR 0.00 Apple - Apple-FD-F1 - F7 Hi05b09 SSR 64.80 (cM) Automated name-based View Maps
EMPc111 SSR 14.36 No other positions
CH04e05 SSR 28.32 Apple - apple integrated map - 7 CH04e05 SSR 31.90 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - F7 CH04e05 SSR 27.30 (cM) Automated name-based View Maps
Apple - Apple-FD-F1 - D7 CH04e05 SSR 34.70 (cM) Automated name-based View Maps
Pear - Pear-Bartlett - Ba7 CH04e05 SSR 20.80 (cM) Automated name-based View Maps
EMPc117 SSR 35.74 No other positions
CN444794 SSR 56.06 No other positions