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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Almond-Almond-RD-F1
(Reference Set) 		Peach-Peach-DG-F1-2009
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Candidate Gene
EST-SSR
IMA (Inter-Microsatellite Amplification)
Mendelian_Trait_Loci
QTL
RAF (Randomly Amplified DNA Fingerprinting)
SRAP (Sequence-Related Amplified Polymorphism)
SSR
Other
 
Show Labels: None Landmarks All
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Almond - Almond-RD-F1 [ View Map Set Info ]
Map Name: G1
Map Start: 0.00 cM
Map Stop: 48.00 cM
Features by Type:
5 SSR
5 Total

Map Features

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Items 1 to 5 of 5.
Almond - Almond-RD-F1 - G1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CPPCT027 SSR 0.00 Prunus - Prunus-TE-F2 - G1 CPPCT027 SSR 23.10 (cM) Automated name-based View Maps
Peach - Peach-DG-F1-2009 - G1 CPPCT027 SSR 56.60 (cM) Automated name-based View Maps
Peach - Peach-PR-F2 - G1 CPPCT027 SSR 23.90 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1R CPPCT027 SSR 0.00 (cM) Automated name-based View Maps
Apricot - Apricot-LL-F2 - G1 CPPCT-27 SSR 16.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - P2175G1 CPPCT027 SSR 24.60 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G1 CPPCT027 SSR 19.80 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1D CPPCT027 SSR 0.00 (cM) Automated name-based View Maps
UDP96-005 SSR 7.00 Peach - Peach-PR-F2 - G1 UDP-005 SSR 38.30 (cM) Automated name-based View Maps
Apricot - Apricot-LL-F2 - G1 UDP96-005(1) SSR 32.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN1 UDP96-005 SSR 65.00 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1D UDP96-005 SSR 7.50 (cM) Automated name-based View Maps
Peach - Peach-DG-F1-2009 - G2 UDP96-005A SSR 41.30 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G1 UDP96-005 SSR 32.30 (cM) Automated name-based View Maps
Apricot - Apricot-GV-F1 - G2G UDP96-005 SSR 69.00 (cM) Automated name-based View Maps
Apricot - Apricot-GV-F1 - G2V UDP96-005 SSR 89.00 (cM) Automated name-based View Maps
Apricot - Apricot-LL-F2 - G5 UDP96-005(2) SSR 3.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - P2175G1 UDP96-005 SSR 48.30 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 UDP96-005 SSR 29.20 (cM) Automated name-based View Maps
CPPCT026 SSR 28.00 Almond - Almond-RD-Parental - G1R CPPCT026 SSR 26.30 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G1 CPPCT026 SSR 46.00 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - P2175G1 CPPCT026 SSR 83.20 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 CPPCT026 SSR 33.90 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1D CPPCT026 SSR 28.80 (cM) Automated name-based View Maps
Prunus - Prunus-P2175xGN22-BC1 - GN1 CPPCT026 SSR 99.10 (cM) Automated name-based View Maps
Apricot - Apricot-LL-F2 - G1 CPPCT-26 SSR 49.00 (cM) Automated name-based View Maps
PMS67 SSR 31.00 Prunus - Prunus-P2175xGN22-BC1 - GN1 pms67 SSR 92.50 (cM) Automated name-based View Maps
Peach - Peach-AJ-F2-2005 - G1 PMS67 SSR 48.00 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1D PMS67 SSR 31.30 (cM) Automated name-based View Maps
Sweet Cherry - EF x NY54 2008 - EF1 PMS67 SSR 84.55 (cM) Automated name-based View Maps
Peach - Peach-JF-F2 - G1 pms67 SSR 92.30 (cM) Automated name-based View Maps
Prunus - Prunus-TE-F2 - G1 PMS67 SSR 45.90 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1R PMS67 SSR 30.10 (cM) Automated name-based View Maps
BPPCT011 SSR 48.00 Prunus - Prunus-P2175xGN22-BC1 - GN1 BPPCT011 SSR 124.90 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1D BPPCT011 SSR 48.40 (cM) Automated name-based View Maps
Almond - Almond-RD-Parental - G1R BPPCT011 SSR 50.50 (cM) Automated name-based View Maps
Peach - Peach-PF-BC1 - G1 BPPCT011 SSR 112.30 (cM) Automated name-based View Maps