Jonathan

Germplasm Overview
NameJonathan
AliasN/A
GRIN IDPI 590185
TypeCultivar
SpeciesMalus x domestica
DescriptionN/A
Origin CountryN/A
Origin DetailUSA
PedigreeN/A
Maternal ParentEsopus Spitzenburg
Paternal ParentN/A
Maternal Parent ofJonagold [view all 32]
Paternal Parent ofTsugaru [view all 13]
Phenotypic Data[view all 16]
SSR Genotype Data[view all 34]
SNP Genotype Data[view all 14150]
Map[view all 6]
DNA LibraryN/A
SequenceN/A
CommentsN/A
Reference[view all 3]
Genetic Map Data
NameTypePopulationTypeGenome Group
Apple-JGD-F1-2015geneticF1
Apple-JGD-F1-BotcankergeneticF1
Apple-JGD-F1-FRRgeneticF1
Apple-GDxJ-F1-2012geneticF1
Apple-JGD-F1-2014geneticF1
Apple-JoPr-BC-2016geneticBC
Qtl
Total 66 records
#NameDataset
1qFRL.JGD-J7.2008.1Apple-fruit_shape-Cao-2015
2qFRL.JGD-J7.2008.2Apple-fruit_shape-Cao-2015
3qFRL.JGD-J11.2009Apple-fruit_shape-Cao-2015
4qFRL.JGD-G1.2014Apple-fruit_shape-Cao-2015
5qFRDIA.JGD-J3.2008Apple-fruit_shape-Cao-2015
6qFRSH.JGD-J11.2008.1Apple-Fruit_Length_Diameter-Han-2014
7qFRSH.JGD-J11.2008.1Apple-fruit_shape-Cao-2015
8qFRSH.JGD-J11.2008.2Apple-Fruit_Length_Diameter-Han-2014
9qFRSH.JGD-J11.2008.2Apple-fruit_shape-Cao-2015
10qFRSH.JGD-J11.2008.3Apple-Fruit_Length_Diameter-Han-2014
11qFRSH.JGD-J11.2008.3Apple-fruit_shape-Cao-2015
12qFRSH.JGD-J11.2008.4Apple-fruit_shape-Cao-2015
13qFRSH.JGD-J11.2009.1Apple-fruit_shape-Cao-2015
14qFRSH.JGD-J11.2009.2Apple-fruit_shape-Cao-2015
15qFRSH.JGD-J5.2014Apple-fruit_shape-Cao-2015
16qFRSH.JGD-J11.2014.1Apple-fruit_shape-Cao-2015
17qFRSH.JGD-J11.2014.2Apple-fruit_shape-Cao-2015
18qFRSH.JGD-J11.2014.3Apple-fruit_shape-Cao-2015
19qFRDIA.JGD-G11.2008Apple-Fruit_Length_Diameter-Han-2014
20qFRDIA.JGD-G2.2008Apple-Fruit_Length_Diameter-Han-2014
21qFRDIA.JGD-G3.2008Apple-Fruit_Length_Diameter-Han-2014
22qFRDIA.JGD-G4.2009Apple-Fruit_Length_Diameter-Han-2014
23qFRDIA.JGD-G8.2008.1Apple-Fruit_Length_Diameter-Han-2014
24qFRDIA.JGD-G8.2008.2Apple-Fruit_Length_Diameter-Han-2014
25qFRDIA.JGD-G8.2008.3Apple-Fruit_Length_Diameter-Han-2014
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Ssr Genotype Data
Total 34 records
Download Table
# Dataset Marker Marker Type Genotype Marker_Allele
1Gao_Chinese_National_Repository_Apple_2015CH05c06genetic_marker122|136CH05c06_122; CH05c06_136
2Gao_Chinese_National_Repository_Apple_2015CH05e04genetic_marker177|185CH05e04_177; CH05e04_185
3Gao_Chinese_National_Repository_Apple_2015BGT23bgenetic_marker199|199BGT23b_199; BGT23b_199
4Gao_Chinese_National_Repository_Apple_2015KA4bgenetic_marker155|159KA4b_155; KA4b_159
5Gao_Chinese_National_Repository_Apple_2015CH01f03bgenetic_marker189|189CH01f03b_189; CH01f03b_189
6Gao_Chinese_National_Repository_Apple_2015CH05h12genetic_marker186|200CH05h12_186; CH05h12_200
7Gao_Chinese_National_Repository_Apple_2015CH02b12genetic_marker143|145CH02b12_143; CH02b12_145
8Gao_Chinese_National_Repository_Apple_2015CH03d07genetic_marker220|224CH03d07_220; CH03d07_224
9Gao_Chinese_National_Repository_Apple_2015CH02a04genetic_marker-9|-9CH02a04_-9; CH02a04_-9
10Gao_Chinese_National_Repository_Apple_2015CH05b06genetic_marker179|189CH05b06_179; CH05b06_189
11Gao_Chinese_National_Repository_Apple_2015CH05d08genetic_marker139|155CH05d08_139; CH05d08_155
12Gao_Chinese_National_Repository_Apple_2015CH05d04genetic_marker193|199CH05d04_193; CH05d04_199
13Gao_Chinese_National_Repository_Apple_2015CH01f07agenetic_marker210|212CH01f07a_210; CH01f07a_212
14Gao_Chinese_National_Repository_Apple_2015CH04h02genetic_marker195|195CH04h02_195; CH04h02_195
15Gao_Chinese_National_Repository_Apple_2015CH04g07genetic_marker190|192CH04g07_190; CH04g07_192
16Gao_Chinese_National_Repository_Apple_2015CH04e03genetic_marker204|214CH04e03_204; CH04e03_214
17Apple_SSR_Genotype_Volk_2020CH01f02genetic_marker208|208CH01f02_208; CH01f02_208
18Apple_SSR_Genotype_Volk_2020CH01f02genetic_marker208|208CH01f02_208; CH01f02_208
19Apple_SSR_Genotype_Volk_2020CH01H01genetic_marker118|134CH01H01_118; CH01H01_134
20Apple_SSR_Genotype_Volk_2020CH01H01genetic_marker118|134CH01H01_118; CH01H01_134
21Apple_SSR_Genotype_Volk_2020CH02d08genetic_marker230|256CH02d08_230; CH02d08_256
22Apple_SSR_Genotype_Volk_2020CH02d08genetic_marker230|256CH02d08_230; CH02d08_256
23Apple_SSR_Genotype_Volk_2020GD12genetic_marker155|155GD12_155; GD12_155
24Apple_SSR_Genotype_Volk_2020GD12genetic_marker155|155GD12_155; GD12_155
25Apple_SSR_Genotype_Volk_2020GD142genetic_marker141|157GD142_141; GD142_157
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Publications
YearPublication
2014Yuansheng Chang, Rui Sun, Huanhuan Sun, Yongbo Zhao, Yuepeng Han, Dongmei Chen, Yi Wang, Xinzhong Zhang, Zhenhai Han. Mapping of quantitative trait loci corroborates independent genetic control of apple size and shape. Scientia Horticulturae. 2014; 174:126–132.
2015Ke Cao, Yuansheng Chang, Rui Sun, Fei Shen, Ting Wu, Yi Wang, Xinzhong Zhang, Zhenhai Han. Candidate gene prediction via quantitative trait locus analysis of fruit shape index traits in apple. Euphytica. 2015; 206(2):381–391.
2021Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5
Snp Genotype Data
Total 14,150 records
Download Table
#DatasetMarker NameAlleleGenotype
1RosBREED_Apple_CRS_SNP_Genotype_2020AFL2T/CA|A
2RosBREED_Apple_CRS_SNP_Genotype_2020CONS61T/CA|A
3RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00002T/GA|A
4RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00010T/GA|A
5RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00015T/CA|B
6RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00022RA|B
7RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00023T/CA|B
8RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00030T/CA|B
9RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00038T/CB|B
10RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00039A/GA|A
11RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00053T/CA|B
12RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00062A/CA|B
13RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00070RA|A
14RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00076T/GA|B
15RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00077A/GA|B
16RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00079A/GA|B
17RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00086T/CB|B
18RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00087A/GA|B
19RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00091T/CA|A
20RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00092T/CA|B
21RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00094T/CA|B
22RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00098T/CA|B
23RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00099T/GA|A
24RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00100T/CA|A
25RosBREED_Apple_CRS_SNP_Genotype_2020GDsnp00107A/CA|B
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...
Cross References
External references for this accession
DatabaseAccession
GRINPI 590185
Maternal Parent Of
Germplasm Name Description Type
Jonagoldaccession
Idaredaccession
Akaneaccession
Blackjonaccession
Crandallaccession
DgR23T35accession
Hatsuakiaccession
Melroseaccession
Monroeaccession
PRI 47-147accession
Wealthyaccession
Jonathan_x_Golden Delicious-F1population
Golden_Delicious_x_Jonathanpopulation
Jonathan_×_Golden_Deliciouspopulation
JoPrpopulation
PRI 47-176accession
PRI47-147accession
Undineaccession
Wrightaccession
Apfel des Parisaccession
Ceres CRAWaccession
Ceres UNIBOaccession
Faurotaccession
Meranaccession
President Boudewijnaccession
PRI 10_147accession
PRI 1293_100accession
Prinses Beatrixaccession
Prinses Marijkeaccession
Sacramentsappleaccession
Sussapfelaccession
Winterperzikappelaccession
Phenotypic Data
Phenotypic Data
Total 16 trait scores
Download Table
# Dataset Descriptor Value
1Acidity_02.5
2Aroma_00.3
3Cn_042.0
4Crisp_00.5
5Firm_01.1
6GrndCol_00.4
7Juice_00.5
8M1_N_0140.0
9M2_N_0227.5
10Mass_g_0156.0
11OvrColType_00.6
12PercOvrCol_03.7
13SkinCol_04.0
14SSC_012.6
15Sweet_03.2
16TA_00.510
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Paternal Parent Of
Germplasm Name Description Type
Tsugaruaccession
Jonagoldaccession
Florinaaccession
Idaredaccession
Crandallaccession
Jonamacaccession
NJ 35437accession
PRI 855-102accession
Wealthyaccession
Priamaccession
PRI855-102accession
Goldjonaccession
Conradaccession
Image