Jonathan

Germplasm Overview
NameJonathan
AliasN/A
GRIN IDPI 590185
TypeCultivar
SpeciesMalus x domestica
DescriptionN/A
Origin CountryN/A
Origin DetailUSA
PedigreeN/A
Maternal ParentEsopus Spitzenburg
Paternal ParentN/A
Maternal Parent ofJonagold [view all 32]
Paternal Parent ofTsugaru [view all 13]
Phenotypic Data[view all 16]
SSR Genotype Data[view all 34]
SNP Genotype Data[view all 14150]
Map[view all 6]
DNA LibraryN/A
SequenceN/A
CommentsN/A
Reference[view all 3]
Population Map
NameTypePopulationTypeGenome Group
Apple-JGD-F1-2015geneticF1
Apple-JGD-F1-BotcankergeneticF1
Apple-JGD-F1-FRRgeneticF1
Apple-GDxJ-F1-2012geneticF1
Apple-JGD-F1-2014geneticF1
Apple-JoPr-BC-2016geneticBC
Publications
YearPublication
2014Yuansheng Chang, Rui Sun, Huanhuan Sun, Yongbo Zhao, Yuepeng Han, Dongmei Chen, Yi Wang, Xinzhong Zhang, Zhenhai Han. Mapping of quantitative trait loci corroborates independent genetic control of apple size and shape. Scientia Horticulturae. 2014; 174:126–132.
2015Ke Cao, Yuansheng Chang, Rui Sun, Fei Shen, Ting Wu, Yi Wang, Xinzhong Zhang, Zhenhai Han. Candidate gene prediction via quantitative trait locus analysis of fruit shape index traits in apple. Euphytica. 2015; 206(2):381–391.
2021Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5
Snp Genotype Data
Total 14,150 records
Download Table
#Marker NameAlleleGenotype
1GDsnp00407MA|B
2GDsnp00418T/CB|B
3GDsnp00420T/CB|B
4GDsnp00423A/GA|A
5GDsnp00429T/CA|A
6GDsnp00440RA|B
7GDsnp00441T/GA|B
8GDsnp00452T/GA|A
9GDsnp00463T/CA|A
10GDsnp00467T/CB|B
11GDsnp00472A/CA|B
12GDsnp00487A/GB|B
13GDsnp00488T/CA|A
14GDsnp00501T/CA|B
15GDsnp00506A/GA|B
16GDsnp00514T/CB|B
17GDsnp00515T/CB|B
18GDsnp00523T/CB|B
19GDsnp00525T/GA|A
20GDsnp00532T/CA|B
21GDsnp00542A/CA|A
22GDsnp00543A/GA|B
23GDsnp00544MA|B
24GDsnp00565T/CA|B
25GDsnp00566A/GB|B
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Paternal Parent Of
Germplasm Name Description Type
Tsugarucultivar
Jonagoldcultivar
Florinacultivar
Idaredcultivar
Crandallcultivar
Jonamaccultivar
NJ 35437breeding_research_material
PRI 855-102breeding_research_material
Wealthycultivar
Priamcultivar
PRI855-102breeding_research_material
Goldjoncultivar
Conradcultivar
Phenotypic Data
Phenotypic Data
Total 16 trait scores
Download Table
# Dataset Descriptor Value
1Apple_CRS_phenotypingAcidity_02.5
2Apple_CRS_phenotypingAroma_00.3
3Apple_CRS_phenotypingCn_042.0
4Apple_CRS_phenotypingCrisp_00.5
5Apple_CRS_phenotypingFirm_01.1
6Apple_CRS_phenotypingGrndCol_00.4
7Apple_CRS_phenotypingJuice_00.5
8Apple_CRS_phenotypingM1_N_0140.0
9Apple_CRS_phenotypingM2_N_0227.5
10Apple_CRS_phenotypingMass_g_0156.0
11Apple_CRS_phenotypingOvrColType_00.6
12Apple_CRS_phenotypingPercOvrCol_03.7
13Apple_CRS_phenotypingSkinCol_04.0
14Apple_CRS_phenotypingSSC_012.6
15Apple_CRS_phenotypingSweet_03.2
16Apple_CRS_phenotypingTA_00.510
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Ssr Genotype Data
Total 34 records
Download Table
# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_SSR_Genotype_Volk_2020GD142genetic_marker141|157GD142_141; GD142_157
2Apple_SSR_Genotype_Volk_2020GD147genetic_marker135|151GD147_135; GD147_151
3Apple_SSR_Genotype_Volk_2020GD147genetic_marker135|151GD147_135; GD147_151
4Apple_SSR_Genotype_Volk_2020GD15genetic_marker146|146GD15_146; GD15_146
5Apple_SSR_Genotype_Volk_2020GD15genetic_marker146|146GD15_146; GD15_146
6Apple_SSR_Genotype_Volk_2020GD162genetic_marker218|242GD162_218; GD162_242
7Apple_SSR_Genotype_Volk_2020GD162genetic_marker218|242GD162_218; GD162_242
8Apple_SSR_Genotype_Volk_2020GD96genetic_marker179|185GD96_179; GD96_185
9Apple_SSR_Genotype_Volk_2020GD96genetic_marker179|185GD96_179; GD96_185
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Maternal Parent Of
Germplasm Name Description Type
Jonagoldcultivar
Idaredcultivar
Akanecultivar
Blackjoncultivar
Crandallcultivar
DgR23T35breeding_research_material
Hatsuakicultivar
Melrosecultivar
Monroecultivar
PRI 47-147breeding_research_material
Wealthycultivar
Jonathan_x_Golden Delicious-F1population
Golden_Delicious_x_Jonathanpopulation
Jonathan_×_Golden_Deliciouspopulation
JoPrpopulation
PRI 47-176selected material
PRI47-147breeding_research_material
Undinecultivar
Wrightcultivar
Apfel des Pariscultivar
Ceres CRAWcultivar
Ceres UNIBOcultivar
Faurotcultivar
Merancultivar
President Boudewijncultivar
PRI 10_147breeding_research_material
PRI 1293_100breeding_research_material
Prinses Beatrixcultivar
Prinses Marijkecultivar
Sacramentsapplecultivar
Sussapfelcultivar
Winterperzikappelcultivar
Image