Ppe-HB-qSSC5 | GDR

Haplotype Block Overview

Annotated Terms

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-qSSC5
Species	Prunus persica
Stock Haplotype	[view all 7]
Haplotype	[view all]

Publications


Year	Publication
2020	Rawandoozi ZJ, Hartmann TP, Carpenedo S, Gasic K, da Silva Linge C, Cai L, Van de Weg E, Byrne DH. Identification and characterization of QTLs for fruit quality traits in peach through a multi-family approach.. BMC genomics. 2020 Jul 29; 21(1):522.

Stock Haplotype

Name	Haplotype
TX2B136	h3 h6
TXW1490_1	h3
Galaxy	h1 h4
VICTOR	h3 h5
Y426–371	h1
Y434–40	h1
Y435–246	h1 h2

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-qSSC5	Peach-RosBREED-4K-2019	5	58.15	72.95

Projects


Project Name
Peach-fruit_quality-Rawandoozi-Haplotype-2020

Haplotypes

Marker	h1	h2	h3	h4	h5	h6
snp_5_15254637	B	B	B	B	A	B
SNP_IGA_600072	B	B	A	A	B	A
SNP_IGA_600169	B	B	A	A	B	A
SNP_IGA_600230	B	B	A	A	B	A
SNP_IGA_600256	A	A	B	B	A	B
SNP_IGA_600509	A	A	B	B	A	A
SNP_IGA_603047	B	B	A	B	B	B
SNP_IGA_604283	B	A	B	A	A	B

Alignments

Feature Name	Type	Location	Analysis
Pp05	chromosome	Pp05:14538721..18236497.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)

Annotated Terms

The following terms have been associated with this haplotype_block:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
MAIN:000192283	total water soluble content