Coop 17

Name	Coop 17
Alias	N/A
GRIN ID	N/A
Type	Breeding Research Material
Species	Malus x domestica
Description	N/A
Origin Country	N/A
Origin Detail	Purdue–Rutgers–Illinois (PRI) scab (Venturia inaequalis) resistance cooperative apple breeding programme
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	Goldrush [view all 4]
Phenotypic Data	N/A
SSR Genotype Data	N/A
SNP Genotype Data	[view all 10295]
Map	[view all 2]
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Howard NP, Peace C, Silverstein KATS, Poets A, Luby JJ, Vanderzande S, Durel CE, Muranty H, Denancé C, and van de Weg E. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Accepted to Horticulture Research.

Name	Type	PopulationType	Genome Group
Apple-C16xC17-F1-2013	genetic	F1
Apple-C16xC17-F1-2012	genetic	F1

Year	Publication
2021	Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5

#	Dataset	Marker Name	Allele	Genotype
1	Apple_SNP_genotype_Howard_2021	SNP_FB_0411238	T/C	A | A
2	Apple_SNP_genotype_Howard_2021	SNP_FB_0411240	T/G	A | A
3	Apple_SNP_genotype_Howard_2021	SNP_FB_0411246	A/G	B | B
4	Apple_SNP_genotype_Howard_2021	SNP_FB_1079904	A/C	B | B
5	Apple_SNP_genotype_Howard_2021	RosBREEDSNP_SNP_TC_3094248_Lg1_02894_MAF50_285661_exon1	T/C	A | A
6	Apple_SNP_genotype_Howard_2021	RosBREEDSNP_SNP_GA_3099492_Lg1_02894_MAF40_411283_exon1	A/G	A | A
7	Apple_SNP_genotype_Howard_2021	SNP_FB_0313817	A/G	A | A
8	Apple_SNP_genotype_Howard_2021	SNP_FB_1089803	T/C	A | A
9	Apple_SNP_genotype_Howard_2021	SNP_FB_1089798	A/G	A | B
10	Apple_SNP_genotype_Howard_2021	SNP_FB_0400909	T/C	B | B
11	Apple_SNP_genotype_Howard_2021	SNP_FB_0400916	A/G	A | B
12	Apple_SNP_genotype_Howard_2021	SNP_FB_0400919	T/C	B | B
13	Apple_SNP_genotype_Howard_2021	SNP_FB_0400922	A/G	B | B
14	Apple_SNP_genotype_Howard_2021	SNP_FB_0400921	T/C	B | B
15	Apple_SNP_genotype_Howard_2021	SNP_FB_1079977	A/C	B | B
16	Apple_SNP_genotype_Howard_2021	RosBREEDSNP_SNP_AC_180528_Lg1_00288_MAF40_302606_exon1	A/C	B | B
17	Apple_SNP_genotype_Howard_2021	RosBREEDSNP_SNP_AC_121548_Lg1_00288_MAF30_MDP0000151845_exon1	T/G	B | B
18	Apple_SNP_genotype_Howard_2021	SNP_FB_0409694	A/C	B | B
19	Apple_SNP_genotype_Howard_2021	SNP_FB_0409675	T/C	B | B
20	Apple_SNP_genotype_Howard_2021	SNP_FB_0409674	T/G	B | B
21	Apple_SNP_genotype_Howard_2021	SNP_FB_0197405	A/C	B | B
22	Apple_SNP_genotype_Howard_2021	SNP_FB_0197414	T/C	A | A
23	Apple_SNP_genotype_Howard_2021	SNP_FB_0197767	T/C	B | B
24	Apple_SNP_genotype_Howard_2021	SNP_FB_0530079	A/G	A | A
25	Apple_SNP_genotype_Howard_2021	SNP_FB_0530074	T/C	A | B