BPPCT020, BPPCT020 (genetic_marker) Prunus persica

Marker Overview
NameBPPCT020
Genbank IDAF374943
TypeSSR
SpeciesPrunus persica
GermplasmOHenry
Source TypeGenomic DNA
Repeat Motif(AG)14GG(AG)7AT(AG)8
PCR Condition94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1BPPCT020.F primer: CGTGGATGGTCAAGATGC
Primer 2BPPCT020.R primer: ATTGACGTGGACTTACAGGTG
Product Length200
PolymorphismP_ BPPCT020
Publication[view all]
ContactE. Dirlewanger
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
OHenryaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-F2G1N/A52.6BPPCT020View
2Almond-VB-F1G1N/A14BPPCT020View
3Peach-ScB-F2-2007G1N/A51.06BPPCT020View
4Peach-CF-F2-20141N/A67.17BPPCT020View
5Prunus-TE-F2-20151N/A49.3BPPCT020View
6Peach-HU-F2G1N/A76.6BPPCT020View
7Prunus-TxE-peachV2.0LG1N/A52.6BPPCT020View
8Peach-CA-BC1-2017LG1N/A61.2BPPCT020View
9Peach-CF-F2G1N/A61.5BPPCT020View
10Peach-DG-F1-2009G1N/A93.2BPPCT020AView
11Peach-DG-F1-2009G6N/A45.1BPPCT020BView
12Peach_Consensus_map_20181N/A70.14BPPCT020View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:33281268..33281752. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:34255110..34255594+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)