BPPCT027, BPPCT027 (genetic_marker) Prunus persica

Marker Overview
NameBPPCT027
Genbank IDAF374937
TypeSSR
SpeciesPrunus persica
GermplasmOHenry
Source TypeGenomic DNA
genomic
Repeat Motif(GA)11
PCR Condition94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1BPPCT027.F primer: CTCTCAAGCATCATGGGC
Primer 2BPPCT027.Forward primer: CTCTCAAGCATCATGGGC
Primer 3BPPCT027.R primer: TGTTGCCCGGTTGTAATATC
Primer 4BPPCT027.Reverse primer: TGTTGCCCGGTTGTAATATC
Product Length249
PolymorphismP_ BPPCT027
Publication[view all]
ContactE. Dirlewanger
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
OHenryaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Almond-NL-F1-2010G1N/A57.63BPPCT027View
2Prunus-TE-F2G1N/A47.3BPPCT027View
3Flowering Cherry-CYxE750-F1-CY1N/A48.7BPPCT027View
4Apricot-LL-F2-Lito-2011LG1N/A60.3BPPCT027View
5Prunus-TxE-peachV2.0LG1N/A47.3BPPCT027View
6Chokecherry-RCxSC-F1-2014RC XVbN/A31.9BPPCT027-1View
7Chokecherry-RCxSC-F1-2017Cho-15N/A80.32BPPCT027-1View
8Chokecherry-RCxSC-F1-2014RC XVbN/A73BPPCT027-2View
9Chokecherry-RCxSC-F1-2014SC IIIN/A39.3BPPCT027-3View
10Chokecherry-RCxSC-F1-2017Cho-3N/A121.7BPPCT027-3View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:33041076..33041695. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:34014917..34015536+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)