CPSCT004, CPSCT004 (genetic_marker) Prunus salicina

Marker Overview
NameCPSCT004
Genbank IDAY426192
TypeSSR
SpeciesPrunus salicina
GermplasmSanta Rosa
Source Typegenomic DNA
Repeat MotifGA
PCR Condition94 C 1 min, 94 C 30 sec, 62 C 30 sec, 72 C 30 sec. 35 cycles, 72 C 5min
Primer 1CPSCT004.F primer: GCTCTGAAGCTCTGCATTGA
Primer 2CPSCT004.Forward Primer: GCTCTGAAGCTCTGCATTGA
Primer 3CPSCT004.R primer: TTTGAAATGGCTATGGAGTACG
Primer 4CPSCT004.Reverse Primer: TTTGAAATGGCTATGGAGTACG
Product Length130
Publication[view all]
ContactP. Arus
Maria Badenes
Contact
NameDetails
P. Arus
First name:Pere
Last name:Arus
Institution:IRTA
Address:Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:pere.arus@irta.es
Maria Badenes
First name:Maria 
Last name:Badenes
Institution:Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:Spain
Email:badenes_mlu@gva.es
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
Santa Rosaaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-F2G7N/A9.5CPSCT004View
2Peach_CxEL_F1-physical-Prunus-persicaV1.0CxEL7N/A6681998CPSCT004View
3Prunus-TE-F2-20157N/A1CPSCT004View
4Prunus-TE-BC1-T1EG7_T1EN/A5CPSCT004View
5Prunus-TxE-peachV2.0LG7N/A9.5CPSCT004View
6Chokecherry-RCxSC-F1-2014RC IIN/A6.8CPSCT004-1View
7Chokecherry-RCxSC-F1-2017Cho-2N/A114.28CPSCT004-1View
8Sweet Cherry-PAxPN-94G7N/A12.9nCPSCT004View
9Sweet Cherry-47G7N/A0nCPSCT004View
10Peach_Consensus_map_20187N/A7.59CPSCT004View
Alignments
Feature NameTypeLocationAnalysis
scaffold_7 supercontig scaffold_7:6681998..6682453. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp07 chromosome Pp07:6681366..6681821+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)