EPDCU5100, EPDCU5100 (genetic_marker) Prunus dulcis

Marker Overview
NameEPDCU5100
Genbank IDBU575100
TypeSSR
SpeciesPrunus dulcis
GermplasmNonpareil
Source TypeEST
Repeat MotifGA
PCR Condition94 C 2 min, 94 C 25 sec, 57 C 20 sec, 72 C 20 sec. 35 cycles, 72 C 5 min
Primer 1EPDCU5100_R: TGCTTAGCCCTGGGTACAAG
Primer 2EPDCUI5100_F: CTCTTCTCGCCTCCCAATTT
Product Length174
PolymorphismP_ EPDCU5100
Publication[view all]
ContactW. Howad
Amy Iezzoni
Contact
NameDetails
W. Howad
First name:Werner
Last name:Howad
Institution:IRTA
Address:Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:werner.howad@irta.es
Amy Iezzoni
First name:Amy
Last name:Iezzoni
Title:Professor
Institution:Michigan State University
Address:A342 PSSB, East Lansing, MI 48824
Country:USA
Email:iezzoni@msu.edu
Phone:517-355-5191 x1391
Keywords:cherry breeder
Last update:Jun 2017
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
Nonpareilaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus Bin MapLG1N/A14.5EPDCU5100View
2Apricot-LV-BC1G1N/A4.8EPDCU5100View
3Sweet Cherry-EFxNY-F1-2008EF1N/A44.48EPDCU5100View
4Sweet Cherry-EFxNY-F1-2008NY1N/A9.91EPDCU5100View
5Peach-CF-F2-20141N/A27.06EPDCU5100View
6Apricot-LL-F2-Lito-2011LG1N/A33.6EPDCU5100View
7Apricot-integrated-Goldrich-2011LG1N/A25.5EPDCU5100View
8Prunus-TxE-peachV2.0LG1N/A14.5EPDCU5100View
9Peach-CF-F2G1N/A25.5EPDCU5100View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:11171058..11172334. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:11619290..11620566+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)