EPPCU1945, EPPCU1945 (genetic_marker) Prunus persica | GDR

Marker Overview

Marker Overview


Name	EPPCU1945
Genbank ID	BU041945
Type	EST-SSR
Species	Prunus persica
Source Type	EST
PCR Condition	94 C 5 min, 94 C 1 min, 55 C 1 min, 72 C 2 min. 35 cycles, 72 C 7min
Primer 1	EPPCU1945.F primer: CTGCTTTGCCTACAAAGAAA
Primer 2	EPPCU1945.R primer: AGCTCAGAATTGCGTATGGT
Product Length	210
Publication	[view all]
Contact	P. Arus

Contact

Name

Details

P. Arus

First name:	Pere
Last name:	Arus
Institution:	IRTA
Address:	Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:	pere.arus@irta.es

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
GDR Markers Database	2004-01-01
Alignment of genetic markers to Prunus persics v2.0	2019-04-11

Publications


Year	Publication
2005	Howad W, Yamamoto T, Dirlewanger E, Testolin R, Cosson P, Cipriani G, Monforte AJ, Georgi L, Abbott AG, Arús P. Mapping with a few plants: using selective mapping for microsatellite saturation of the Prunus reference map. 2005 Nov; 171(3):1305-1309.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Prunus Bin Map	LG1	N/A	35.7	EPPCU1945	View
2	Apricot-LL-F2-Lito-2011	LG1	N/A	55.2	EPPCU1945	View
3	Prunus-TxE-peachV2.0	LG1	N/A	35.7	EPPCU1945	View

Alignments

Feature Name	Type	Location	Analysis
scaffold_1	supercontig	scaffold_1:29356873..29358768.	Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01	chromosome	Pp01:30330818..30332713+	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)