MA023a, MA023a (genetic_marker) Prunus persica | GDR

Marker Overview

Marker Overview


Name	MA023a
Genbank ID	N/A
Type	SSR
Species	Prunus persica
Germplasm	Akatsuki
Source Type	genomic DNA
Repeat Motif	AG
Primer 1	MA023a.F primer: AGAAGCAAAGCTAACAGCC
Primer 2	MA023a.R primer: GATGACTCATTGACGCAAGA
Product Length	192
Publication	[view all]
Contact	T. Yamamoto

Contact

Name

Details

T. Yamamoto

First name:	Toshiya
Last name:	Yamamoto
Title:	researcher
Institution:	National Institute of Fruit Tree Science, Japan
Address:	National Institute of Fruit Tree Science Fujimoto 2-1, Tsukuba Ibaraki 305-8605, Japan
Email:	toshiya@affrc.go.jp
Phone:	81-29-838-6474,6491
Keywords:	Pyrus pyrifolia

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
GDR Markers Database	2004-01-01
Alignment of genetic markers to Prunus persics v2.0	2019-04-11

Publications


Year	Publication
2002	Yamamoto T, Mochida K, Imai T, Shi Y.Z, Ogiwara I, Hayashi T. Microsatellite markers in peach [Prunus persica (L.) Batsch] derived from an enriched genomic and cDNA libraries. Molecular Ecology Notes. 2002; 2(3):298-301.
2005	Yamamoto T, Yamaguchi M, Hayashi T. An Integrated Genetic Linkage Map of Peach by SSR, STS, AFLP and RAPD. Journal of the Japanese Society for Horticultural Science. 2005; 74(3):204-213.

Germplasm


Stock Name	Type
Akatsuki	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Prunus Bin Map	LG6	N/A	30.1	MA023aA	View
2	Sweet Cherry-EFxNY-F1-2008	NY8	N/A	0	MA023aB	View
3	Sweet Cherry-EFxNY-F1-2008	EF8	N/A	9.19	MA023aB	View
4	Prunus Bin Map	LG8	N/A	13	MA023aB	View

Alignments

Feature Name	Type	Location	Analysis
scaffold_8	supercontig	scaffold_8:4598296..4599008.	Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp08	chromosome	Pp08:4596836..4597548+	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)