pchgms1, pchgms1 (genetic_marker) Prunus persica

Marker Overview
Namepchgms1
Genbank IDN/A
TypeSSR
SpeciesPrunus persica
GermplasmBicentennial
Source Typegenomic DNA
genomic
Repeat Motif(AC)12(AT)6
Primer 1pchgms1.F primer: GGG TAA ATA TGC CCA TTG TGC AAT C
Primer 2pchgms1.Forward Primer: GGGTAAATATGCCCATTGTGCAATC
Primer 3pchgms1.R primer: GGA TCA TTG AAC TAC GTC AAT CCT C
Primer 4pchgms1.Reverse Primer: GGATCATTGAACTACGTCAATCCTC
Product Length194
Publication[view all]
ContactA. Abbott
Amy Iezzoni
Maria Badenes
Contact
NameDetails
A. Abbott
First name:Albert
Last name:Abbott
Institution:Clemson University
Address:100 Jordan Hall, Dept. of Genetics and Biochemistry, Clemson University, Clemson, SC, USA 29634
Email:aalbert@clemson.edu
Phone:1-864-656-3060
Amy Iezzoni
First name:Amy
Last name:Iezzoni
Title:Professor
Institution:Michigan State University
Address:A342 PSSB, East Lansing, MI 48824
Country:USA
Email:iezzoni@msu.edu
Phone:517-355-5191 x1391
Keywords:cherry breeder
Last update:Jun 2017
Maria Badenes
First name:Maria 
Last name:Badenes
Institution:Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:Spain
Email:badenes_mlu@gva.es
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Germplasm
Stock NameType
Bicentennialaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-F2G2N/A35.1pchgms1View
2Peach-DG-F1-2009G2N/A73.4pchgms1View
3Peach-LN-F2G1N/A53.7pchgms1View
4Peach-AJ-F2-2005G2N/A58.3pchgms1View
5Almond-FT-F1G2TN/A41pchgms1View
6Almond-FT-F1G2FN/A45pchgms1View
7Peach-SP-F2-20032N/A65pchgms1View
8Peach-HBOki-F2G2N/A49.2pchgms1View
9Peach-AJ-F2G2N/A58.3pchgms1View
10Sweet Cherry-EFxNY-F1-2008EF2N/A57.64pchgms1View
11Peach-SP-BC2-2004G2N/A86pchgms1View
12Prunus Bin MapLG2N/A35.1pchgms1View
13Flowering Cherry-CYxE750-F1-CY2N/A64.7pchgms1View
14Peach-LAxFG-F2LG2N/A33.7pchgms1View
15Peach-PIxSL-F2LG2N/A31.5pchgms1View
16Prunus-TE-F2-20152N/A33.7pchgms1View
17Chokecherry-RCxSC-F1-2014SC XIN/A47.1pchgms1View
18Chokecherry-RCxSC-F1-2017Cho-14N/A18.03pchgms1View
19Peach-DvsS-BC2LG2N/A27pchgms1View
20Prunus-TE-BC1-T1EG2_T1EN/A28.8pchgms1View
21Prunus-TxE-peachV2.0LG2N/A35.1pchgms1View
22Sweet Cherry-PAxPN-94G2N/A68.4pchgms1View
23Sweet Cherry-47G2N/A73.3pchgms1View
24Peach_Consensus_map_20182N/A51.83pchgms1View
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:21255417..21255417. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:24830251..24830441. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)