RosCOS1559-306_snp_sweet_cherry_Pp3_20247750, RosCOS1559-306_snp_sweet_cherry_Pp3_20247750 (genetic_marker) Prunus avium

Marker Overview
NameRosCOS1559-306_snp_sweet_cherry_Pp3_20247750
dbSNP IDss490559159
SNP Array ID
IRSC 6K SNP array for cherry:RosCOS1559-306_snp_sweet_cherry_Pp3_20247750
TypeSNP
SNP AllelesT/G
SpeciesPrunus avium
Publication[view all]
Associated WithROSC_FMLY_CSA1_1559
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R3N/A58.5R1559-306_3_20247750View
2Sweet Cherry-RL-F1-2015L3N/A70.37R1559-306_3_20247750View
3Prunus-TE-6K cherry SNP-estimate3N/A43.53RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
4sweet cherry-consensus-map-2012-6K cherry SNP-estimate3N/A83.63RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
5Sweet Cherry-V-F1LG3N/A61.69RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
6Sweet Cherry-VxC-F1LG3N/A86.85RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
7Sweet Cherry-RG-F1-2014R3N/A67.4RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
8Sweet Cherry-RosBREED-1.6K-20193N/A73.62RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
9Sweet Cherry-RosBREED-3.8K-20203N/A75.61RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
10Sweet Cherry-AxS-F13N/A103.46RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
11Sweet Cherry-V-F1-6+9K_array3N/A52.15RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
12Sweet Cherry-VxC-F1-6+9K_array3N/A88.83RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
13Sweet_Cherry-Crump-panel-20223N/A76.09RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
14Sour Cherry-M172x25-F1LG3N/A73.62RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
15SourCherry-RE-F1LG3N/A73.62RosCOS1559-306_snp_sweet_cherry_Pp3_20247750View
16Sweet Cherry-RL-F1-2013LG03N/A73.6ss490559159View
Alignments
Feature NameTypeLocationAnalysis
scaffold_3 supercontig scaffold_3:20247750..20247750. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp03 chromosome Pp03:25590333..25590333. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr3 chromosome PAV_r1.0chr3:20140698..20140698. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)