RosBREED_snp_sweet_cherry_Pp1_00538005, RosBREED_snp_sweet_cherry_Pp1_00538005 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_00538005
dbSNP IDss490545406
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_00538005
TypeSNP
SNP AllelesT/C
SpeciesPrunus avium
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-V-F1LG1N/A1.26RosBREED_snp_sweet_cherry_Pp1_00538005View
2Prunus-TE-6K cherry SNP-estimate1N/A1.21RosBREED_snp_sweet_cherry_Pp1_00538005View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A0RosBREED_snp_sweet_cherry_Pp1_00538005View
4Sweet Cherry-VxC-F1LG1N/A1.28RosBREED_snp_sweet_cherry_Pp1_00538005View
5Sweet Cherry-V-F1-6+9K_array1N/A1.27RosBREED_snp_sweet_cherry_Pp1_00538005View
6Sweet Cherry-RosBREED-3.8K-20201N/A2.27RosBREED_snp_sweet_cherry_Pp1_00538005View
7Sweet Cherry-RosBREED-1.6K-20191N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
8Sweet Cherry-VxC-F1-6+9K_array1N/A5.46RosBREED_snp_sweet_cherry_Pp1_00538005View
9Sweet_Cherry-Crump-panel-20221N/A2.27RosBREED_snp_sweet_cherry_Pp1_00538005View
10Sour Cherry-M172x25-F1LG1N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
11SourCherry-Montx25-F1LG1N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
12SourCherry-25x25-F1LG1N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
13Sour Cherry-US-F1LG1N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
14SourCherry-RE-F1LG1N/A1.49RosBREED_snp_sweet_cherry_Pp1_00538005View
15Sweet Cherry-BTK-F1-2013LG01N/A6.2ss490545406View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:538005..538005. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:538003..538003. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:589393..589393. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)