RosCOS1201-071_snp_sweet_cherry_Pp1_00450381, RosCOS1201-071_snp_sweet_cherry_Pp1_00450381 (genetic_marker) Prunus avium

Marker Overview
NameRosCOS1201-071_snp_sweet_cherry_Pp1_00450381
Aliasss490558959
rs271790245
R1201-071_1_00450381
dbSNP IDss490558959
SNP Array ID
IRSC 6K SNP array for cherry:RosCOS1201-071_snp_sweet_cherry_Pp1_00450381
TypeSNP
SNP AllelesT/G
SpeciesPrunus avium
Publication[view all]
Associated WithROSC_FMLY_CSA1_1201
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

This genetic_marker is associated with the following contig feature(s):

Feature NameUnique NameSpeciesType
ROSC_FMLY_CSA1_1201ROSC_FMLY_CSA1_1201Rosaceae Family Genera sp.contig


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
R1201-071_1_00450381R1201-071_1_00450381Prunus aviummarker_locus
RosCOS1201-071_snp_sweet_cherry_Pp1_00450381RosCOS1201-071_snp_sweet_cherry_Pp1_00450381Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R1N/A0R1201-071_1_00450381View
2Sweet Cherry-RL-F1-2015R1N/A0R1201-071_1_00450381View
3Sweet Cherry-RosBREED-1.6K-20191N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
4Sweet Cherry-V-F1LG1N/A0.63RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
5Prunus-TE-6K cherry SNP-estimate1N/A1.01RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
6sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
7Sweet Cherry-VxC-F1LG1N/A0.64RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
8Sweet Cherry-RL-F1-2014R1N/A0.8RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
9Sweet Cherry-RG-F1-2014R1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
10Sour Cherry-M172x25-F1LG1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
11SourCherry-25x25-F1LG1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
12Sour Cherry-US-F1LG1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
13SourCherry-RE-F1LG1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
14SweetCherry-FX-F1-XX1N/A0RosCOS1201-071_snp_sweet_cherry_Pp1_00450381View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:450381..450381. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:450500..450500. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)