RosBREED_snp_sweet_cherry_Pp1_35371782, RosBREED_snp_sweet_cherry_Pp1_35371782 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_35371782
AliasRosBREED_snp_sweet_1_35371782
ss490547882
rs271786862
Rsweet_1_35371782
dbSNP IDss490547882
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_35371782
TypeSNP
SNP AllelesA/G
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rsweet_1_35371782Rsweet_1_35371782Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_35371782RosBREED_snp_sweet_cherry_Pp1_35371782Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_35371782RosBREED_snp_sweet_cherry_Pp1_35371782-108.33Prunus aviummarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-01-31Pav-HB-01-31Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-01-31_2Prunus aviumhaplotype
3Pav-HB-01-31_3Prunus aviumhaplotype
4Pav-HB-01-31_4Prunus aviumhaplotype
5Pav-HB-01-31_5Prunus aviumhaplotype
6Pav-HB-01-31_6Prunus aviumhaplotype
7Pav-HB-01-31_7Prunus aviumhaplotype
8Pav-HB-01-31_8Prunus aviumhaplotype
9Pav-HB-01-31_9Prunus aviumhaplotype
10Pav-HB-01-31_10Prunus aviumhaplotype
11Pav-HB-01-31_11Prunus aviumhaplotype
12Pav-HB-01-31_12Prunus aviumhaplotype
13Pav-HB-01-31_13Prunus aviumhaplotype
14Pav-HB-01-31_14Prunus aviumhaplotype
15Pav-HB-01-31_15Prunus aviumhaplotype
16Pav-HB-01-31_16Prunus aviumhaplotype
17Pav-HB-01-31_17Prunus aviumhaplotype
18Pav-HB-01-31_18Prunus aviumhaplotype
19Pav-HB-01-31_19Prunus aviumhaplotype
20Pav-HB-01-31_20Prunus aviumhaplotype
21Pav-HB-01-31_21Prunus aviumhaplotype
22Pav-HB-01-31_22Prunus aviumhaplotype
23Pav-HB-01-31_23Prunus aviumhaplotype
24Pav-HB-01-31_24Prunus aviumhaplotype
25Pav-HB-01-31_25Prunus aviumhaplotype
26Pav-HB-01-31_26Prunus aviumhaplotype
27Pav-HB-01-31_27Prunus aviumhaplotype
28Pav-HB-01-31_28Prunus aviumhaplotype
29Pav-HB-01-31_29Prunus aviumhaplotype
30Pav-HB-01-31_30Prunus aviumhaplotype
31Pav-HB-01-31_31Prunus aviumhaplotype
32Pav-HB-01-31_32Prunus aviumhaplotype
33Pav-HB-01-31_33Prunus aviumhaplotype
34Pav-HB-01-31_34Prunus aviumhaplotype
35Pav-HB-01-31_35Prunus aviumhaplotype
36Pav-HB-01-31_36Prunus aviumhaplotype
37Pav-HB-01-31_37Prunus aviumhaplotype
38Pav-HB-01-31_38Prunus aviumhaplotype
39Pav-HB-01-31_39Prunus aviumhaplotype
40Pav-HB-01-31_40Prunus aviumhaplotype
41Pav-HB-01-31_41Prunus aviumhaplotype
42Pav-HB-01-31_42Prunus aviumhaplotype
43Pav-HB-01-31_43Prunus aviumhaplotype
44Pav-HB-01-31_44Prunus aviumhaplotype
45Pav-HB-01-31_45Prunus aviumhaplotype
46Pav-HB-01-31_46Prunus aviumhaplotype
47Pav-HB-01-31_47Prunus aviumhaplotype
48Pav-HB-01-31_48Prunus aviumhaplotype
49Pav-HB-01-31_49Prunus aviumhaplotype
50Pav-HB-01-31_50Prunus aviumhaplotype
51Pav-HB-01-31_51Prunus aviumhaplotype
52Pav-HB-01-31_52Prunus aviumhaplotype
53Pav-HB-01-31_53Prunus aviumhaplotype
54Pav-HB-01-31_54Prunus aviumhaplotype
55Pav-HB-01-31_55Prunus aviumhaplotype
56Pav-HB-01-31_56Prunus aviumhaplotype
57Pav-HB-01-31_57Prunus aviumhaplotype
58Pav-HB-01-31_58Prunus aviumhaplotype
59Pav-HB-01-31_59Prunus aviumhaplotype
60Pav-HB-01-31_60Prunus aviumhaplotype
61Pav-HB-01-31_61Prunus aviumhaplotype
62Pav-HB-01-31_62Prunus aviumhaplotype
63Pav-HB-01-31_63Prunus aviumhaplotype
64Pav-HB-01-31_64Prunus aviumhaplotype
65Pav-HB-01-31_65Prunus aviumhaplotype
66Pav-HB-01-31_66Prunus aviumhaplotype
67Pav-HB-01-31_67Prunus aviumhaplotype
68Pav-HB-01-31_68Prunus aviumhaplotype
69Pav-HB-01-31_69Prunus aviumhaplotype
70Pav-HB-01-31_70Prunus aviumhaplotype
71Pav-HB-01-31_71Prunus aviumhaplotype
72Pav-HB-01-31_72Prunus aviumhaplotype
73Pav-HB-01-31_73Prunus aviumhaplotype
74Pav-HB-01-31_74Prunus aviumhaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G1N/A99.23Rsweet_1_35371782View
2Prunus-TE-6K cherry SNP-estimate1N/A52.76RosBREED_snp_sweet_cherry_Pp1_35371782View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A132.62RosBREED_snp_sweet_cherry_Pp1_35371782View
4Sweet Cherry-V-F1LG1N/A115.89RosBREED_snp_sweet_cherry_Pp1_35371782View
5Sweet Cherry-VxC-F1LG1N/A110.82RosBREED_snp_sweet_cherry_Pp1_35371782View
6Sweet Cherry-RosBREED-3.8K-20201N/A109.11RosBREED_snp_sweet_cherry_Pp1_35371782View
7Sweet Cherry-RosBREED-1.6K-20191N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
8Sweet Cherry-V-F1-6+9K_array1N/A103.54RosBREED_snp_sweet_cherry_Pp1_35371782View
9Sweet Cherry-VxC-F1-6+9K_array1N/A134.14RosBREED_snp_sweet_cherry_Pp1_35371782View
10Sour Cherry-M172x25-F1LG1N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
11SourCherry-Montx25-F1LG1N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
12SourCherry-25x25-F1LG1N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
13Sour Cherry-US-F1LG1N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
14SourCherry-RE-F1LG1N/A108.33RosBREED_snp_sweet_cherry_Pp1_35371782View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:35371782..35371782. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:36344992..36344992. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:31195581..31195581. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)