RosBREED_snp_sweet_cherry_Pp1_35408469, RosBREED_snp_sweet_cherry_Pp1_35408469 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_35408469
AliasRosBREED_snp_sweet_1_35408469
ss490547886
rs271786863
Rsweet_1_35408469
dbSNP IDss490547886
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_35408469
TypeSNP
SNP AllelesA/G
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rsweet_1_35408469Rsweet_1_35408469Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_35408469RosBREED_snp_sweet_cherry_Pp1_35408469Prunus aviummarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-01-32Pav-HB-01-32Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-01-32_2Prunus aviumhaplotype
3Pav-HB-01-32_3Prunus aviumhaplotype
4Pav-HB-01-32_4Prunus aviumhaplotype
5Pav-HB-01-32_5Prunus aviumhaplotype
6Pav-HB-01-32_6Prunus aviumhaplotype
7Pav-HB-01-32_7Prunus aviumhaplotype
8Pav-HB-01-32_8Prunus aviumhaplotype
9Pav-HB-01-32_9Prunus aviumhaplotype
10Pav-HB-01-32_10Prunus aviumhaplotype
11Pav-HB-01-32_11Prunus aviumhaplotype
12Pav-HB-01-32_12Prunus aviumhaplotype
13Pav-HB-01-32_13Prunus aviumhaplotype
14Pav-HB-01-32_14Prunus aviumhaplotype
15Pav-HB-01-32_15Prunus aviumhaplotype
16Pav-HB-01-32_16Prunus aviumhaplotype
17Pav-HB-01-32_17Prunus aviumhaplotype
18Pav-HB-01-32_18Prunus aviumhaplotype
19Pav-HB-01-32_19Prunus aviumhaplotype
20Pav-HB-01-32_20Prunus aviumhaplotype
21Pav-HB-01-32_21Prunus aviumhaplotype
22Pav-HB-01-32_22Prunus aviumhaplotype
23Pav-HB-01-32_23Prunus aviumhaplotype
24Pav-HB-01-32_24Prunus aviumhaplotype
25Pav-HB-01-32_25Prunus aviumhaplotype
26Pav-HB-01-32_26Prunus aviumhaplotype
27Pav-HB-01-32_27Prunus aviumhaplotype
28Pav-HB-01-32_28Prunus aviumhaplotype
29Pav-HB-01-32_29Prunus aviumhaplotype
30Pav-HB-01-32_30Prunus aviumhaplotype
31Pav-HB-01-32_31Prunus aviumhaplotype
32Pav-HB-01-32_32Prunus aviumhaplotype
33Pav-HB-01-32_33Prunus aviumhaplotype
34Pav-HB-01-32_34Prunus aviumhaplotype
35Pav-HB-01-32_35Prunus aviumhaplotype
36Pav-HB-01-32_36Prunus aviumhaplotype
37Pav-HB-01-32_37Prunus aviumhaplotype
38Pav-HB-01-32_38Prunus aviumhaplotype
39Pav-HB-01-32_39Prunus aviumhaplotype
40Pav-HB-01-32_40Prunus aviumhaplotype
41Pav-HB-01-32_41Prunus aviumhaplotype
42Pav-HB-01-32_42Prunus aviumhaplotype
43Pav-HB-01-32_43Prunus aviumhaplotype
44Pav-HB-01-32_44Prunus aviumhaplotype
45Pav-HB-01-32_45Prunus aviumhaplotype
46Pav-HB-01-32_46Prunus aviumhaplotype
47Pav-HB-01-32_47Prunus aviumhaplotype
48Pav-HB-01-32_48Prunus aviumhaplotype
49Pav-HB-01-32_49Prunus aviumhaplotype
50Pav-HB-01-32_50Prunus aviumhaplotype
51Pav-HB-01-32_51Prunus aviumhaplotype
52Pav-HB-01-32_52Prunus aviumhaplotype
53Pav-HB-01-32_53Prunus aviumhaplotype
54Pav-HB-01-32_54Prunus aviumhaplotype
55Pav-HB-01-32_55Prunus aviumhaplotype
56Pav-HB-01-32_56Prunus aviumhaplotype
57Pav-HB-01-32_57Prunus aviumhaplotype
58Pav-HB-01-32_58Prunus aviumhaplotype
59Pav-HB-01-32_59Prunus aviumhaplotype
60Pav-HB-01-32_60Prunus aviumhaplotype
61Pav-HB-01-32_61Prunus aviumhaplotype
62Pav-HB-01-32_62Prunus aviumhaplotype
63Pav-HB-01-32_63Prunus aviumhaplotype
64Pav-HB-01-32_64Prunus aviumhaplotype
65Pav-HB-01-32_65Prunus aviumhaplotype
66Pav-HB-01-32_66Prunus aviumhaplotype
67Pav-HB-01-32_67Prunus aviumhaplotype
68Pav-HB-01-32_68Prunus aviumhaplotype
69Pav-HB-01-32_69Prunus aviumhaplotype
70Pav-HB-01-32_70Prunus aviumhaplotype
71Pav-HB-01-32_71Prunus aviumhaplotype
72Pav-HB-01-32_72Prunus aviumhaplotype
73Pav-HB-01-32_73Prunus aviumhaplotype
74Pav-HB-01-32_74Prunus aviumhaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G1N/A100.15Rsweet_1_35408469View
2Prunus-TE-6K cherry SNP-estimate1N/A52.89RosBREED_snp_sweet_cherry_Pp1_35408469View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A132.77RosBREED_snp_sweet_cherry_Pp1_35408469View
4Sweet Cherry-RosBREED-3.8K-20201N/A109.3RosBREED_snp_sweet_cherry_Pp1_35408469View
5Sweet Cherry-RosBREED-1.6K-20191N/A108.52RosBREED_snp_sweet_cherry_Pp1_35408469View
6Sweet Cherry-A-F11N/A149.9RosBREED_snp_sweet_cherry_Pp1_35408469View
7Sweet Cherry-AxS-F11N/A141.46RosBREED_snp_sweet_cherry_Pp1_35408469View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:35408469..35408469. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:36381679..36381679. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:31240045..31240045. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)