RosBREED_snp_sweet_cherry_Pp3_12188902, RosBREED_snp_sweet_cherry_Pp3_12188902 (genetic_marker) Prunus avium

Marker Overview

Name

RosBREED_snp_sweet_cherry_Pp3_12188902

dbSNP ID

SNP Array ID

IRSC 6K SNP array for cherry:

RosBREED_snp_sweet_cherry_Pp3_12188902

Type

SNP

SNP Alleles

T/G

Species

Libraries


Library Name	Type
IRSC 6K SNP array for cherry	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a1	2016-11-21

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Prunus-TE-6K cherry SNP-estimate	3	N/A	30.39	RosBREED_snp_sweet_cherry_Pp3_12188902	View
2	sweet cherry-consensus-map-2012-6K cherry SNP-estimate	3	N/A	48.38	RosBREED_snp_sweet_cherry_Pp3_12188902	View
3	Sweet Cherry-VxC-F1	LG3	N/A	49.12	RosBREED_snp_sweet_cherry_Pp3_12188902	View
4	Sweet Cherry-CxC-F2	LG3	N/A	47.86	RosBREED_snp_sweet_cherry_Pp3_12188902	View
5	Sweet Cherry-BCxBC-F2	LG3	N/A	23.61	RosBREED_snp_sweet_cherry_Pp3_12188902	View
6	Sweet Cherry-A-F1	3	N/A	61.12	RosBREED_snp_sweet_cherry_Pp3_12188902	View
7	Sweet Cherry-AxS-F1	3	N/A	61.12	RosBREED_snp_sweet_cherry_Pp3_12188902	View
8	Sweet Cherry-VxC-F1-6+9K_array	3	N/A	51.74	RosBREED_snp_sweet_cherry_Pp3_12188902	View
9	Sweet Cherry-RL-Regina-2013	LG03	N/A	44	ss490551623	View
10	Sweet Cherry-BTK-F1-2013	LG03	N/A	40.1	ss490551623	View
11	Sweet Cherry-RL-F1-2013	LG03	N/A	41.1	ss490551623	View

Alignments

Feature Name	Type	Location	Analysis
scaffold_3	supercontig	scaffold_3:12188902..12188902.	Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp03	chromosome	Pp03:17532206..17532206.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr3	chromosome	PAV_r1.0chr3:9217134..9217134.	Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)