RosCOS1500-271_snp_sweet_cherry_Pp5_09393638, RosCOS1500-271_snp_sweet_cherry_Pp5_09393638 (genetic_marker) Prunus avium

Marker Overview
NameRosCOS1500-271_snp_sweet_cherry_Pp5_09393638
dbSNP IDss490559113
SNP Array ID
IRSC 6K SNP array for cherry:RosCOS1500-271_snp_sweet_cherry_Pp5_09393638
TypeSNP
SNP AllelesT/C
SpeciesPrunus avium
Publication[view all]
Associated WithROSC_FMLY_CSA1_1500
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RL-F1-2015L5N/A18.52R1500-271_5_09393638View
2Prunus-TE-6K cherry SNP-estimate5N/A16.98RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate5N/A29.26RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
4Sweet Cherry-V-F1LG5N/A30RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
5Sweet Cherry-VxC-F1LG5N/A28.25RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
6Sweet Cherry-RL-F1-2014L5N/A20.1RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
7Sweet Cherry-RosBREED-1.6K-20195N/A18.53RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
8Sweet Cherry-RosBREED-3.8K-20205N/A18.53RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
9Sweet Cherry-V-F1-6+9K_array5N/A25.28RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
10Sweet Cherry-VxC-F1-6+9K_array5N/A28.18RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
11Sweet_Cherry-Crump-panel-20225N/A18.53RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
12Sweet Cherry-RL-Lapins-2023L5N/A21.28RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
13Sour Cherry-M172x25-F1LG5N/A18.53RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
14SourCherry-RE-F1LG5N/A18.53RosCOS1500-271_snp_sweet_cherry_Pp5_09393638View
15Sweet Cherry-RL-Lapins-2013LG05N/A18.4ss490559113View
16Sweet Cherry-BTK-F1-2013LG05N/A21.5ss490559113View
17Sweet Cherry-RL-F1-2013LG05N/A18.5ss490559113View
Alignments
Feature NameTypeLocationAnalysis
scaffold_5 supercontig scaffold_5:9393638..9393638. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp05 chromosome Pp05:9394649..9394649. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr5 chromosome PAV_r1.0chr5:7060289..7060289. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)