RosBREED_snp_sweet_cherry_Pp1_00196391, RosBREED_snp_sweet_cherry_Pp1_00196391 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_00196391
AliasRosBREED_snp_sweet_1_00196391
ss490545378
rs271786213
dbSNP IDss490545378
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_00196391
TypeSNP
SNP AllelesT/G
SpeciesPrunus avium
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREED_snp_sweet_cherry_Pp1_00196391RosBREED_snp_sweet_cherry_Pp1_00196391Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A0.44RosBREED_snp_sweet_cherry_Pp1_00196391View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
3Sour Cherry-M172x25-F1LG1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
4SourCherry-Montx25-F1LG1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
5SourCherry-25x25-F1LG1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
6Sour Cherry-US-F1LG1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
7SourCherry-RE-F1LG1N/A0RosBREED_snp_sweet_cherry_Pp1_00196391View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:196391..196391. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:196389..196389. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:220275..220275. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)