RosBREED_snp_tart_cherry_f_Pp1_03271516, RosBREED_snp_tart_cherry_f_Pp1_03271516 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_03271516
dbSNP IDss490545779
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_03271516
TypeSNP
SNP AllelesA/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A6.72RosBREED_snp_tart_cherry_f_Pp1_03271516View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A13.21RosBREED_snp_tart_cherry_f_Pp1_03271516View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_03271516 ID=RosBREED_snp_tart_cherry_f_Pp1_03271516; Name=RosBREED_snp_tart_cherry_f_Pp1_03271516; organism=Prunus cerasus; type=genetic_marker; length=207bp
TTGAAATAATGCATCATAAATCTAGCCTGTGTTCTCAAATTTGGAAAAAT
AAATGAATAAAAATGCAATGGGTGTTCTACTTCATTCTAAAGTTCTAGAA
A[A/C]ACTATTTTAACAGAAGCACCTCCTTTCTGCTTCTCTAAATTCCG
GAACCATCTGCTCCTATGAATCAAAACACCGCCTTATACAATCAAATTTT
AAAGCGA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:3271516..3271516. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:3271277..3271277. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:3279665..3279665. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)