RosBREED_snp_tart_cherry_f_Pp1_07328179, RosBREED_snp_tart_cherry_f_Pp1_07328179 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_07328179
dbSNP IDss490545926
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_07328179
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A11.08RosBREED_snp_tart_cherry_f_Pp1_07328179View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A33.12RosBREED_snp_tart_cherry_f_Pp1_07328179View
3Sour Cherry-M172x25-F1LG1N/A17.77RosBREED_snp_tart_cherry_f_Pp1_07328179View
4SourCherry-Montx25-F1LG1N/A17.77RosBREED_snp_tart_cherry_f_Pp1_07328179View
5SourCherry-25x25-F1LG1N/A17.77RosBREED_snp_tart_cherry_f_Pp1_07328179View
6Sour Cherry-US-F1LG1N/A17.77RosBREED_snp_tart_cherry_f_Pp1_07328179View
7SourCherry-RE-F1LG1N/A17.77RosBREED_snp_tart_cherry_f_Pp1_07328179View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_07328179 ID=RosBREED_snp_tart_cherry_f_Pp1_07328179; Name=RosBREED_snp_tart_cherry_f_Pp1_07328179; organism=Prunus cerasus; type=genetic_marker; length=207bp
TTTCAGATTTCATTCAGTTCAGAACACCATTTCTATCTCCATCTATTTGT
GTTCAAATTCTGTGTGGTCATAGAAGATCTTATAATAATTTGAGCTTTTC
C[A/G]TATCCAAAGAAGATCTTGCAATTGGGCGGCAATGAGGCAAAGGC
AGAGTGTTGCTGTTTCATCAGCAGCAGATACAGACAGAACCGAAAACCCA
ATTCCTT
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:7328179..7328179. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:7777542..7777542. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:5706321..5706321. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)