RosBREED_snp_tart_cherry_a_Pp2_19629831, RosBREED_snp_tart_cherry_a_Pp2_19629831 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp2_19629831
AliasRosBREED_snp_tart_2_19629831
ss490547320
rs268600559
Rtart_2_19629831
dbSNP IDss490547320
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp2_19629831
TypeSNP
SNP AllelesA/C
SpeciesPrunus cerasus
PolymorphismP_ RosBREED_snp_tart_cherry_a_Pp2_19629831
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rtart_2_19629831Rtart_2_19629831Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_19629831RosBREED_snp_tart_cherry_a_Pp2_19629831Prunus cerasusmarker_locus
ss490547320ss490547320Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_19629831RosBREED_snp_tart_cherry_a_Pp2_19629831-45.75Prunus cerasusmarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G2N/A53.14Rtart_2_19629831View
2Prunus-TE-6K cherry SNP-estimate2N/A27.02RosBREED_snp_tart_cherry_a_Pp2_19629831View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate2N/A37.58RosBREED_snp_tart_cherry_a_Pp2_19629831View
4Sweet Cherry-C-F1LG2N/A49.24RosBREED_snp_tart_cherry_a_Pp2_19629831View
5Sweet Cherry-VxC-F1LG2N/A53.96RosBREED_snp_tart_cherry_a_Pp2_19629831View
6Sweet Cherry-CxC-F2LG2N/A54.3RosBREED_snp_tart_cherry_a_Pp2_19629831View
7Sweet Cherry-RG-F1-2014G2N/A58.7RosBREED_snp_tart_cherry_a_Pp2_19629831View
8Sweet Cherry-RosBREED-3.8K-20202N/A46.01RosBREED_snp_tart_cherry_a_Pp2_19629831View
9Sweet Cherry-RosBREED-1.6K-20192N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
10Sweet Cherry-C-F1-6+9K_array2N/A50.2RosBREED_snp_tart_cherry_a_Pp2_19629831View
11Sweet Cherry-VxC-F1-6+9K_array2N/A51.09RosBREED_snp_tart_cherry_a_Pp2_19629831View
12Sweet Cherry-BTK-Kordia-2013LG02N/A46.7ss490547320View
13Sweet Cherry-BTK-F1-2013LG02N/A47.8ss490547320View
14Sweet Cherry-QTL-HotSpot-Chr2-2017Chr02N/A45.8ss490547320View
15Sour Cherry-M172x25-F1LG2N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
16SourCherry-Montx25-F1LG2N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
17SourCherry-25x25-F1LG2N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
18Sour Cherry-US-F1LG2N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
19SourCherry-RE-F1LG2N/A45.75RosBREED_snp_tart_cherry_a_Pp2_19629831View
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:19629831..19629831. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:23205384..23205384. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:17125827..17125827. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)