RosBREED_snp_tart_cherry_a_Pp1_00212925, RosBREED_snp_tart_cherry_a_Pp1_00212925 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_00212925
dbSNP IDss490545688
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_00212925
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A0.48RosBREED_snp_tart_cherry_a_Pp1_00212925View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
3Sweet Cherry-BCxBC-F2LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
4Sweet Cherry-RL-F1-2014R1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
5Sour Cherry-M172x25-F1LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
6SourCherry-Montx25-F1LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
7SourCherry-25x25-F1LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
8Sour Cherry-US-F1LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
9SourCherry-RE-F1LG1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
10Sweet Cherry-RosBREED-3.8K-20201N/A0.78RosBREED_snp_tart_cherry_a_Pp1_00212925View
11Sweet Cherry-RosBREED-1.6K-20191N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
12Sweet_Cherry-Crump-panel-20221N/A0.78RosBREED_snp_tart_cherry_a_Pp1_00212925View
13Sweet Cherry-RL-Regina-2023R1N/A0RosBREED_snp_tart_cherry_a_Pp1_00212925View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_00212925 ID=RosBREED_snp_tart_cherry_a_Pp1_00212925; Name=RosBREED_snp_tart_cherry_a_Pp1_00212925; organism=Prunus cerasus; type=genetic_marker; length=207bp
TTATTCCAAGTACGTGAACATGCCATAAAAGGGTGGAAAGTAAACGGTTT
ATCAAGATTGGACAAGCATCTCCAACGTTACTCGTTTTTCAGCTAAATTT
T[A/G]GGGCACGTTTAGTAGTGCTTTTAGAGACTTAAGGGAGTTCAAAA
GCATTTGACAGAAAAAGTGCTTATGTATTATAAAAGCACTAAAAGTGTTT
TATGGAA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:212925..212925. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:212923..212923. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:252969..252969. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)