RosBREED_snp_tart_cherry_a_Pp2_04976130, RosBREED_snp_tart_cherry_a_Pp2_04976130 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp2_04976130
AliasRosBREED_snp_tart_2_04976130
ss490547061
rs268600492
Rtart_2_04976130
dbSNP IDss490547061
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp2_04976130
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rtart_2_04976130Rtart_2_04976130Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_04976130RosBREED_snp_tart_cherry_a_Pp2_04976130Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_04976130RosBREED_snp_tart_cherry_a_Pp2_04976130-11.974Prunus cerasusmarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-02-5Pav-HB-02-5Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-02-5_2Prunus cerasushaplotype
3Pav-HB-02-5_3Prunus cerasushaplotype
4Pav-HB-02-5_4Prunus cerasushaplotype
5Pav-HB-02-5_5Prunus cerasushaplotype
6Pav-HB-02-5_6Prunus cerasushaplotype
7Pav-HB-02-5_7Prunus cerasushaplotype
8Pav-HB-02-5_8Prunus cerasushaplotype
9Pav-HB-02-5_9Prunus cerasushaplotype
10Pav-HB-02-5_10Prunus cerasushaplotype
11Pav-HB-02-5_11Prunus cerasushaplotype
12Pav-HB-02-5_12Prunus cerasushaplotype
13Pav-HB-02-5_13Prunus cerasushaplotype
14Pav-HB-02-5_14Prunus cerasushaplotype
15Pav-HB-02-5_15Prunus cerasushaplotype
16Pav-HB-02-5_16Prunus cerasushaplotype
17Pav-HB-02-5_17Prunus cerasushaplotype
18Pav-HB-02-5_18Prunus cerasushaplotype
19Pav-HB-02-5_19Prunus cerasushaplotype
20Pav-HB-02-5_20Prunus cerasushaplotype
21Pav-HB-02-5_21Prunus cerasushaplotype
22Pav-HB-02-5_22Prunus cerasushaplotype
23Pav-HB-02-5_23Prunus cerasushaplotype
24Pav-HB-02-5_24Prunus cerasushaplotype
25Pav-HB-02-5_25Prunus cerasushaplotype
26Pav-HB-02-5_26Prunus cerasushaplotype
27Pav-HB-02-5_27Prunus cerasushaplotype
28Pav-HB-02-5_28Prunus cerasushaplotype
29Pav-HB-02-5_29Prunus cerasushaplotype
30Pav-HB-02-5_30Prunus cerasushaplotype
31Pav-HB-02-5_31Prunus cerasushaplotype
32Pav-HB-02-5_32Prunus cerasushaplotype
33Pav-HB-02-5_33Prunus cerasushaplotype
34Pav-HB-02-5_34Prunus cerasushaplotype
35Pav-HB-02-5_35Prunus cerasushaplotype
36Pav-HB-02-5_36Prunus cerasushaplotype
37Pav-HB-02-5_37Prunus cerasushaplotype
38Pav-HB-02-5_38Prunus cerasushaplotype
39Pav-HB-02-5_39Prunus cerasushaplotype
40Pav-HB-02-5_40Prunus cerasushaplotype
41Pav-HB-02-5_41Prunus cerasushaplotype
42Pav-HB-02-5_42Prunus cerasushaplotype
43Pav-HB-02-5_43Prunus cerasushaplotype
44Pav-HB-02-5_44Prunus cerasushaplotype
45Pav-HB-02-5_45Prunus cerasushaplotype
46Pav-HB-02-5_46Prunus cerasushaplotype
47Pav-HB-02-5_47Prunus cerasushaplotype
48Pav-HB-02-5_48Prunus cerasushaplotype
49Pav-HB-02-5_49Prunus cerasushaplotype
50Pav-HB-02-5_50Prunus cerasushaplotype
51Pav-HB-02-5_51Prunus cerasushaplotype
52Pav-HB-02-5_52Prunus cerasushaplotype
53Pav-HB-02-5_53Prunus cerasushaplotype
54Pav-HB-02-5_54Prunus cerasushaplotype
55Pav-HB-02-5_55Prunus cerasushaplotype
56Pav-HB-02-5_56Prunus cerasushaplotype
57Pav-HB-02-5_57Prunus cerasushaplotype
58Pav-HB-02-5_58Prunus cerasushaplotype
59Pav-HB-02-5_59Prunus cerasushaplotype
60Pav-HB-02-5_60Prunus cerasushaplotype
61Pav-HB-02-5_61Prunus cerasushaplotype
62Pav-HB-02-5_62Prunus cerasushaplotype
63Pav-HB-02-5_63Prunus cerasushaplotype
64Pav-HB-02-5_64Prunus cerasushaplotype
65Pav-HB-02-5_65Prunus cerasushaplotype
66Pav-HB-02-5_66Prunus cerasushaplotype
67Pav-HB-02-5_67Prunus cerasushaplotype
68Pav-HB-02-5_68Prunus cerasushaplotype
69Pav-HB-02-5_69Prunus cerasushaplotype
70Pav-HB-02-5_70Prunus cerasushaplotype
71Pav-HB-02-5_71Prunus cerasushaplotype
72Pav-HB-02-5_72Prunus cerasushaplotype
73Pav-HB-02-5_73Prunus cerasushaplotype
74Pav-HB-02-5_74Prunus cerasushaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G2N/A22.9Rtart_2_04976130View
2Prunus-TE-6K cherry SNP-estimate2N/A8.83RosBREED_snp_tart_cherry_a_Pp2_04976130View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate2N/A1.43RosBREED_snp_tart_cherry_a_Pp2_04976130View
4Sweet Cherry-VxC-F1LG2N/A17.05RosBREED_snp_tart_cherry_a_Pp2_04976130View
5Sweet Cherry-CxC-F2LG2N/A20.47RosBREED_snp_tart_cherry_a_Pp2_04976130View
6Sweet Cherry-BCxBC-F2LG2N/A13.67RosBREED_snp_tart_cherry_a_Pp2_04976130View
7Sweet Cherry-RG-F1-2014G2N/A22.8RosBREED_snp_tart_cherry_a_Pp2_04976130View
8Sweet Cherry-RosBREED-3.8K-20202N/A7.88RosBREED_snp_tart_cherry_a_Pp2_04976130View
9Sweet Cherry-RosBREED-1.6K-20192N/A7.62RosBREED_snp_tart_cherry_a_Pp2_04976130View
10Sweet Cherry-AxS-F12N/A17.07RosBREED_snp_tart_cherry_a_Pp2_04976130View
11Sweet Cherry-VxC-F1-6+9K_array2N/A14.91RosBREED_snp_tart_cherry_a_Pp2_04976130View
12SweetCherry-FX-F1-XX2N/A11.97RosBREED_snp_tart_cherry_a_Pp2_04976130View
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:4976130..4976130. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:6721173..6721173. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)