RosBREED_snp_tart_cherry_a_Pp2_26081257, RosBREED_snp_tart_cherry_a_Pp2_26081257 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp2_26081257
AliasRosBREED_snp_tart_2_26081257
ss490547648
rs268600643
Rtart_2_26081257
dbSNP IDss490547648
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp2_26081257
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rtart_2_26081257Rtart_2_26081257Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_26081257RosBREED_snp_tart_cherry_a_Pp2_26081257Prunus cerasusmarker_locus
ss490547648ss490547648Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp2_26081257RosBREED_snp_tart_cherry_a_Pp2_26081257-83.329Prunus cerasusmarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-02-22Pav-HB-02-22Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-02-22_2Prunus cerasushaplotype
3Pav-HB-02-22_3Prunus cerasushaplotype
4Pav-HB-02-22_4Prunus cerasushaplotype
5Pav-HB-02-22_5Prunus cerasushaplotype
6Pav-HB-02-22_6Prunus cerasushaplotype
7Pav-HB-02-22_7Prunus cerasushaplotype
8Pav-HB-02-22_8Prunus cerasushaplotype
9Pav-HB-02-22_9Prunus cerasushaplotype
10Pav-HB-02-22_10Prunus cerasushaplotype
11Pav-HB-02-22_11Prunus cerasushaplotype
12Pav-HB-02-22_12Prunus cerasushaplotype
13Pav-HB-02-22_13Prunus cerasushaplotype
14Pav-HB-02-22_14Prunus cerasushaplotype
15Pav-HB-02-22_15Prunus cerasushaplotype
16Pav-HB-02-22_16Prunus cerasushaplotype
17Pav-HB-02-22_17Prunus cerasushaplotype
18Pav-HB-02-22_18Prunus cerasushaplotype
19Pav-HB-02-22_19Prunus cerasushaplotype
20Pav-HB-02-22_20Prunus cerasushaplotype
21Pav-HB-02-22_21Prunus cerasushaplotype
22Pav-HB-02-22_22Prunus cerasushaplotype
23Pav-HB-02-22_23Prunus cerasushaplotype
24Pav-HB-02-22_24Prunus cerasushaplotype
25Pav-HB-02-22_25Prunus cerasushaplotype
26Pav-HB-02-22_26Prunus cerasushaplotype
27Pav-HB-02-22_27Prunus cerasushaplotype
28Pav-HB-02-22_28Prunus cerasushaplotype
29Pav-HB-02-22_29Prunus cerasushaplotype
30Pav-HB-02-22_30Prunus cerasushaplotype
31Pav-HB-02-22_31Prunus cerasushaplotype
32Pav-HB-02-22_32Prunus cerasushaplotype
33Pav-HB-02-22_33Prunus cerasushaplotype
34Pav-HB-02-22_34Prunus cerasushaplotype
35Pav-HB-02-22_35Prunus cerasushaplotype
36Pav-HB-02-22_36Prunus cerasushaplotype
37Pav-HB-02-22_37Prunus cerasushaplotype
38Pav-HB-02-22_38Prunus cerasushaplotype
39Pav-HB-02-22_39Prunus cerasushaplotype
40Pav-HB-02-22_40Prunus cerasushaplotype
41Pav-HB-02-22_41Prunus cerasushaplotype
42Pav-HB-02-22_42Prunus cerasushaplotype
43Pav-HB-02-22_43Prunus cerasushaplotype
44Pav-HB-02-22_44Prunus cerasushaplotype
45Pav-HB-02-22_45Prunus cerasushaplotype
46Pav-HB-02-22_46Prunus cerasushaplotype
47Pav-HB-02-22_47Prunus cerasushaplotype
48Pav-HB-02-22_48Prunus cerasushaplotype
49Pav-HB-02-22_49Prunus cerasushaplotype
50Pav-HB-02-22_50Prunus cerasushaplotype
51Pav-HB-02-22_51Prunus cerasushaplotype
52Pav-HB-02-22_52Prunus cerasushaplotype
53Pav-HB-02-22_53Prunus cerasushaplotype
54Pav-HB-02-22_54Prunus cerasushaplotype
55Pav-HB-02-22_55Prunus cerasushaplotype
56Pav-HB-02-22_56Prunus cerasushaplotype
57Pav-HB-02-22_57Prunus cerasushaplotype
58Pav-HB-02-22_58Prunus cerasushaplotype
59Pav-HB-02-22_59Prunus cerasushaplotype
60Pav-HB-02-22_60Prunus cerasushaplotype
61Pav-HB-02-22_61Prunus cerasushaplotype
62Pav-HB-02-22_62Prunus cerasushaplotype
63Pav-HB-02-22_63Prunus cerasushaplotype
64Pav-HB-02-22_64Prunus cerasushaplotype
65Pav-HB-02-22_65Prunus cerasushaplotype
66Pav-HB-02-22_66Prunus cerasushaplotype
67Pav-HB-02-22_67Prunus cerasushaplotype
68Pav-HB-02-22_68Prunus cerasushaplotype
69Pav-HB-02-22_69Prunus cerasushaplotype
70Pav-HB-02-22_70Prunus cerasushaplotype
71Pav-HB-02-22_71Prunus cerasushaplotype
72Pav-HB-02-22_72Prunus cerasushaplotype
73Pav-HB-02-22_73Prunus cerasushaplotype
74Pav-HB-02-22_74Prunus cerasushaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RL-F1-2015R2N/A79.94Rtart_2_26081257View
2Prunus-TE-6K cherry SNP-estimate2N/A47.23RosBREED_snp_tart_cherry_a_Pp2_26081257View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate2N/A77.37RosBREED_snp_tart_cherry_a_Pp2_26081257View
4Sweet Cherry-RosBREED-3.8K-20202N/A69.94RosBREED_snp_tart_cherry_a_Pp2_26081257View
5Sweet Cherry-RosBREED-1.6K-20192N/A69.68RosBREED_snp_tart_cherry_a_Pp2_26081257View
6Sweet Cherry-A-F12N/A104.98RosBREED_snp_tart_cherry_a_Pp2_26081257View
7Sweet Cherry-AxS-F12N/A96.64RosBREED_snp_tart_cherry_a_Pp2_26081257View
8Sweet Cherry-RL-Regina-2013LG02N/A79.4ss490547648View
9SweetCherry-FX-F1-XX2N/A83.33RosBREED_snp_tart_cherry_a_Pp2_26081257View
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:26081257..26081257. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:29678600..29678600. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:24524894..24524894. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)