RosBREED_snp_tart_cherry_a_Pp4_12532690, RosBREED_snp_tart_cherry_a_Pp4_12532690 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp4_12532690
dbSNP IDss490548738
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp4_12532690
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
PolymorphismP_ RosBREED_snp_tart_cherry_a_Pp4_12532690
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate4N/A42.26RosBREED_snp_tart_cherry_a_Pp4_12532690View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate4N/A38.6RosBREED_snp_tart_cherry_a_Pp4_12532690View
3Sour Cherry-M172x25-F1LG4N/A34.09RosBREED_snp_tart_cherry_a_Pp4_12532690View
4SourCherry-Montx25-F1LG4N/A34.09RosBREED_snp_tart_cherry_a_Pp4_12532690View
5SourCherry-25x25-F1LG4N/A34.09RosBREED_snp_tart_cherry_a_Pp4_12532690View
6Sour Cherry-US-F1LG4N/A34.09RosBREED_snp_tart_cherry_a_Pp4_12532690View
7SourCherry-RE-F1LG4N/A34.09RosBREED_snp_tart_cherry_a_Pp4_12532690View
Sequence
>RosBREED_snp_tart_cherry_a_Pp4_12532690 ID=RosBREED_snp_tart_cherry_a_Pp4_12532690; Name=RosBREED_snp_tart_cherry_a_Pp4_12532690; organism=Prunus cerasus; type=genetic_marker; length=207bp
GCAAAGGAAAGATTTCTCAAACAATGACAAAATTATTGCACGAACAGTCA
ACTTCAAATGGACAACTCTTCATAAGTTTCTTCAGATAATTTTTGTCTGT
G[T/C]ATCCTTTAATTTCTCAGTTTCTTGCTTGTGAATCTAAAGCATCT
GGCACCCAATATACCAAAAAAATCTGCAAAGGACATTGTGGTCTCAATCT
TGGGTTT
Alignments
Feature NameTypeLocationAnalysis
scaffold_4 supercontig scaffold_4:12532690..12532690. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp04 chromosome Pp04:12543836..12543836. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr4 chromosome PAV_r1.0chr4:15260480..15260480. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)