RosBREED_snp_tart_cherry_a_Pp4_25256362, RosBREED_snp_tart_cherry_a_Pp4_25256362 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp4_25256362
dbSNP IDss490548886
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp4_25256362
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate4N/A52.55RosBREED_snp_tart_cherry_a_Pp4_25256362View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate4N/A50.65RosBREED_snp_tart_cherry_a_Pp4_25256362View
3Sweet Cherry-V-F1LG2N/A3.98RosBREED_snp_tart_cherry_a_Pp4_25256362View
4Sweet Cherry-VxC-F1LG2N/A15.02RosBREED_snp_tart_cherry_a_Pp4_25256362View
5Sweet Cherry-V-F1-6+9K_array2N/A15.76RosBREED_snp_tart_cherry_a_Pp4_25256362View
6Sweet Cherry-VxC-F1-6+9K_array2N/A13.74RosBREED_snp_tart_cherry_a_Pp4_25256362View
Sequence
>RosBREED_snp_tart_cherry_a_Pp4_25256362 ID=RosBREED_snp_tart_cherry_a_Pp4_25256362; Name=RosBREED_snp_tart_cherry_a_Pp4_25256362; organism=Prunus cerasus; type=genetic_marker; length=207bp
AAGGACACTTGTCTTTTTTTTTCATGCCCCTTATAAAATAAAACACAATC
ATTTATACATGCATGAATGTTTTCATAGCCCAAGCCAAGACCTCTCAACA
T[T/C]TTCTTGCATGCATTGTAAGATTCAGGAAGATAATTAGGTTTAGG
ACACATCCGCCTCTTGACTTCTAGCATCCTATCAAAAGACTTGTTAGTCC
ATTGACT
Alignments
Feature NameTypeLocationAnalysis
scaffold_4 supercontig scaffold_4:25256362..25256362. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp04 chromosome Pp04:21653711..21653711. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)