RosBREED_snp_tart_cherry_a_Pp2_20685451, RosBREED_snp_tart_cherry_a_Pp2_20685451 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp2_20685451
dbSNP IDss490547370
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp2_20685451
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate2N/A32RosBREED_snp_tart_cherry_a_Pp2_20685451View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate2N/A47.58RosBREED_snp_tart_cherry_a_Pp2_20685451View
3Sweet Cherry-C-F1LG2N/A53.7RosBREED_snp_tart_cherry_a_Pp2_20685451View
4Sweet Cherry-VxC-F1LG2N/A58.01RosBREED_snp_tart_cherry_a_Pp2_20685451View
5Sweet Cherry-CxC-F2LG2N/A59.07RosBREED_snp_tart_cherry_a_Pp2_20685451View
6Sweet Cherry-C-F1-6+9K_array2N/A54.74RosBREED_snp_tart_cherry_a_Pp2_20685451View
7Sweet Cherry-VxC-F1-6+9K_array2N/A54.47RosBREED_snp_tart_cherry_a_Pp2_20685451View
Sequence
>RosBREED_snp_tart_cherry_a_Pp2_20685451 ID=RosBREED_snp_tart_cherry_a_Pp2_20685451; Name=RosBREED_snp_tart_cherry_a_Pp2_20685451; organism=Prunus cerasus; type=genetic_marker; length=207bp
AACACTTTCCCTGATCCTATGACGTGGCGTATCACTGACCAATCAGAAAC
TCGGATAGCTTTTTACCCCTTGTGCAAATGCAAGAGCAAAACCCCTATAT
A[T/C]ACACAACCATGGGCACACAAGTTCCATGCATCTAGCAGTCACGG
AAATACTCCACAGCAAGACGTCAGTGTGTATATATAAGTACCCATAACAA
CAAACCC
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:20685451..20685451. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:24260284..24260284. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:18901189..18901189. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)