RosBREED_snp_tart_cherry_a_Pp1_00694731, RosBREED_snp_tart_cherry_a_Pp1_00694731 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_00694731
AliasRosBREED_snp_tart_1_00694731
ss490545708
rs268600153
Rtart_1_00694731
dbSNP IDss490545708
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_00694731
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rtart_1_00694731Rtart_1_00694731Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp1_00694731RosBREED_snp_tart_cherry_a_Pp1_00694731Prunus cerasusmarker_locus
ss490545708ss490545708Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp1_00694731RosBREED_snp_tart_cherry_a_Pp1_00694731-4.16Prunus cerasusmarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-01-1Pav-HB-01-1Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-01-1_2Prunus cerasushaplotype
3Pav-HB-01-1_3Prunus cerasushaplotype
4Pav-HB-01-1_4Prunus cerasushaplotype
5Pav-HB-01-1_5Prunus cerasushaplotype
6Pav-HB-01-1_6Prunus cerasushaplotype
7Pav-HB-01-1_7Prunus cerasushaplotype
8Pav-HB-01-1_8Prunus cerasushaplotype
9Pav-HB-01-1_9Prunus cerasushaplotype
10Pav-HB-01-1_10Prunus cerasushaplotype
11Pav-HB-01-1_11Prunus cerasushaplotype
12Pav-HB-01-1_12Prunus cerasushaplotype
13Pav-HB-01-1_13Prunus cerasushaplotype
14Pav-HB-01-1_14Prunus cerasushaplotype
15Pav-HB-01-1_15Prunus cerasushaplotype
16Pav-HB-01-1_16Prunus cerasushaplotype
17Pav-HB-01-1_17Prunus cerasushaplotype
18Pav-HB-01-1_18Prunus cerasushaplotype
19Pav-HB-01-1_19Prunus cerasushaplotype
20Pav-HB-01-1_20Prunus cerasushaplotype
21Pav-HB-01-1_21Prunus cerasushaplotype
22Pav-HB-01-1_22Prunus cerasushaplotype
23Pav-HB-01-1_23Prunus cerasushaplotype
24Pav-HB-01-1_24Prunus cerasushaplotype
25Pav-HB-01-1_25Prunus cerasushaplotype
26Pav-HB-01-1_26Prunus cerasushaplotype
27Pav-HB-01-1_27Prunus cerasushaplotype
28Pav-HB-01-1_28Prunus cerasushaplotype
29Pav-HB-01-1_29Prunus cerasushaplotype
30Pav-HB-01-1_30Prunus cerasushaplotype
31Pav-HB-01-1_31Prunus cerasushaplotype
32Pav-HB-01-1_32Prunus cerasushaplotype
33Pav-HB-01-1_33Prunus cerasushaplotype
34Pav-HB-01-1_34Prunus cerasushaplotype
35Pav-HB-01-1_35Prunus cerasushaplotype
36Pav-HB-01-1_36Prunus cerasushaplotype
37Pav-HB-01-1_37Prunus cerasushaplotype
38Pav-HB-01-1_38Prunus cerasushaplotype
39Pav-HB-01-1_39Prunus cerasushaplotype
40Pav-HB-01-1_40Prunus cerasushaplotype
41Pav-HB-01-1_41Prunus cerasushaplotype
42Pav-HB-01-1_42Prunus cerasushaplotype
43Pav-HB-01-1_43Prunus cerasushaplotype
44Pav-HB-01-1_44Prunus cerasushaplotype
45Pav-HB-01-1_45Prunus cerasushaplotype
46Pav-HB-01-1_46Prunus cerasushaplotype
47Pav-HB-01-1_47Prunus cerasushaplotype
48Pav-HB-01-1_48Prunus cerasushaplotype
49Pav-HB-01-1_49Prunus cerasushaplotype
50Pav-HB-01-1_50Prunus cerasushaplotype
51Pav-HB-01-1_51Prunus cerasushaplotype
52Pav-HB-01-1_52Prunus cerasushaplotype
53Pav-HB-01-1_53Prunus cerasushaplotype
54Pav-HB-01-1_54Prunus cerasushaplotype
55Pav-HB-01-1_55Prunus cerasushaplotype
56Pav-HB-01-1_56Prunus cerasushaplotype
57Pav-HB-01-1_57Prunus cerasushaplotype
58Pav-HB-01-1_58Prunus cerasushaplotype
59Pav-HB-01-1_59Prunus cerasushaplotype
60Pav-HB-01-1_60Prunus cerasushaplotype
61Pav-HB-01-1_61Prunus cerasushaplotype
62Pav-HB-01-1_62Prunus cerasushaplotype
63Pav-HB-01-1_63Prunus cerasushaplotype
64Pav-HB-01-1_64Prunus cerasushaplotype
65Pav-HB-01-1_65Prunus cerasushaplotype
66Pav-HB-01-1_66Prunus cerasushaplotype
67Pav-HB-01-1_67Prunus cerasushaplotype
68Pav-HB-01-1_68Prunus cerasushaplotype
69Pav-HB-01-1_69Prunus cerasushaplotype
70Pav-HB-01-1_70Prunus cerasushaplotype
71Pav-HB-01-1_71Prunus cerasushaplotype
72Pav-HB-01-1_72Prunus cerasushaplotype
73Pav-HB-01-1_73Prunus cerasushaplotype
74Pav-HB-01-1_74Prunus cerasushaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G1N/A0.9Rtart_1_00694731View
2Sweet Cherry-RL-F1-2015L1N/A0Rtart_1_00694731View
3Prunus-TE-6K cherry SNP-estimate1N/A1.52RosBREED_snp_tart_cherry_a_Pp1_00694731View
4sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A0.57RosBREED_snp_tart_cherry_a_Pp1_00694731View
5Sweet Cherry-BCxBC-F2LG1N/A1.52RosBREED_snp_tart_cherry_a_Pp1_00694731View
6Sweet Cherry-RosBREED-3.8K-20201N/A4.94RosBREED_snp_tart_cherry_a_Pp1_00694731View
7Sweet Cherry-RosBREED-1.6K-20191N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
8Sweet Cherry-RL-Lapins-2013LG01N/A1.7ss490545708View
9Sweet Cherry-RL-F1-2013LG01N/A4.2ss490545708View
10Sour Cherry-M172x25-F1LG1N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
11SourCherry-Montx25-F1LG1N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
12SourCherry-25x25-F1LG1N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
13Sour Cherry-US-F1LG1N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
14SourCherry-RE-F1LG1N/A4.16RosBREED_snp_tart_cherry_a_Pp1_00694731View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:694731..694731. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:694648..694648. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:753870..753870. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)