RosBREED_snp_tart_cherry_a_Pp4_03565023, RosBREED_snp_tart_cherry_a_Pp4_03565023 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp4_03565023
AliasRosBREED_snp_tart_4_03565023
ss490548462
rs268600848
Rtart_4_03565023
dbSNP IDss490548462
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp4_03565023
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rtart_4_03565023Rtart_4_03565023Prunus cerasusmarker_locus
RosBREED_snp_tart_cherry_a_Pp4_03565023RosBREED_snp_tart_cherry_a_Pp4_03565023Prunus cerasusmarker_locus
ss490548462ss490548462Prunus cerasusmarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-04-2Pav-HB-04-2Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-04-2_2Prunus cerasushaplotype
3Pav-HB-04-2_3Prunus cerasushaplotype
4Pav-HB-04-2_4Prunus cerasushaplotype
5Pav-HB-04-2_5Prunus cerasushaplotype
6Pav-HB-04-2_6Prunus cerasushaplotype
7Pav-HB-04-2_7Prunus cerasushaplotype
8Pav-HB-04-2_8Prunus cerasushaplotype
9Pav-HB-04-2_9Prunus cerasushaplotype
10Pav-HB-04-2_10Prunus cerasushaplotype
11Pav-HB-04-2_11Prunus cerasushaplotype
12Pav-HB-04-2_12Prunus cerasushaplotype
13Pav-HB-04-2_13Prunus cerasushaplotype
14Pav-HB-04-2_14Prunus cerasushaplotype
15Pav-HB-04-2_15Prunus cerasushaplotype
16Pav-HB-04-2_16Prunus cerasushaplotype
17Pav-HB-04-2_17Prunus cerasushaplotype
18Pav-HB-04-2_18Prunus cerasushaplotype
19Pav-HB-04-2_19Prunus cerasushaplotype
20Pav-HB-04-2_20Prunus cerasushaplotype
21Pav-HB-04-2_21Prunus cerasushaplotype
22Pav-HB-04-2_22Prunus cerasushaplotype
23Pav-HB-04-2_23Prunus cerasushaplotype
24Pav-HB-04-2_24Prunus cerasushaplotype
25Pav-HB-04-2_25Prunus cerasushaplotype
26Pav-HB-04-2_26Prunus cerasushaplotype
27Pav-HB-04-2_27Prunus cerasushaplotype
28Pav-HB-04-2_28Prunus cerasushaplotype
29Pav-HB-04-2_29Prunus cerasushaplotype
30Pav-HB-04-2_30Prunus cerasushaplotype
31Pav-HB-04-2_31Prunus cerasushaplotype
32Pav-HB-04-2_32Prunus cerasushaplotype
33Pav-HB-04-2_33Prunus cerasushaplotype
34Pav-HB-04-2_34Prunus cerasushaplotype
35Pav-HB-04-2_35Prunus cerasushaplotype
36Pav-HB-04-2_36Prunus cerasushaplotype
37Pav-HB-04-2_37Prunus cerasushaplotype
38Pav-HB-04-2_38Prunus cerasushaplotype
39Pav-HB-04-2_39Prunus cerasushaplotype
40Pav-HB-04-2_40Prunus cerasushaplotype
41Pav-HB-04-2_41Prunus cerasushaplotype
42Pav-HB-04-2_42Prunus cerasushaplotype
43Pav-HB-04-2_43Prunus cerasushaplotype
44Pav-HB-04-2_44Prunus cerasushaplotype
45Pav-HB-04-2_45Prunus cerasushaplotype
46Pav-HB-04-2_46Prunus cerasushaplotype
47Pav-HB-04-2_47Prunus cerasushaplotype
48Pav-HB-04-2_48Prunus cerasushaplotype
49Pav-HB-04-2_49Prunus cerasushaplotype
50Pav-HB-04-2_50Prunus cerasushaplotype
51Pav-HB-04-2_51Prunus cerasushaplotype
52Pav-HB-04-2_52Prunus cerasushaplotype
53Pav-HB-04-2_53Prunus cerasushaplotype
54Pav-HB-04-2_54Prunus cerasushaplotype
55Pav-HB-04-2_55Prunus cerasushaplotype
56Pav-HB-04-2_56Prunus cerasushaplotype
57Pav-HB-04-2_57Prunus cerasushaplotype
58Pav-HB-04-2_58Prunus cerasushaplotype
59Pav-HB-04-2_59Prunus cerasushaplotype
60Pav-HB-04-2_60Prunus cerasushaplotype
61Pav-HB-04-2_61Prunus cerasushaplotype
62Pav-HB-04-2_62Prunus cerasushaplotype
63Pav-HB-04-2_63Prunus cerasushaplotype
64Pav-HB-04-2_64Prunus cerasushaplotype
65Pav-HB-04-2_65Prunus cerasushaplotype
66Pav-HB-04-2_66Prunus cerasushaplotype
67Pav-HB-04-2_67Prunus cerasushaplotype
68Pav-HB-04-2_68Prunus cerasushaplotype
69Pav-HB-04-2_69Prunus cerasushaplotype
70Pav-HB-04-2_70Prunus cerasushaplotype
71Pav-HB-04-2_71Prunus cerasushaplotype
72Pav-HB-04-2_72Prunus cerasushaplotype
73Pav-HB-04-2_73Prunus cerasushaplotype
74Pav-HB-04-2_74Prunus cerasushaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RL-F1-2015L4N/A10.19Rtart_4_03565023View
2Prunus-TE-6K cherry SNP-estimate4N/A11.27RosBREED_snp_tart_cherry_a_Pp4_03565023View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate4N/A12.44RosBREED_snp_tart_cherry_a_Pp4_03565023View
4Sweet Cherry-RosBREED-3.8K-20204N/A10.44RosBREED_snp_tart_cherry_a_Pp4_03565023View
5Sweet Cherry-RosBREED-1.6K-20194N/A10.11RosBREED_snp_tart_cherry_a_Pp4_03565023View
6Sweet Cherry-S-F14N/A15.59RosBREED_snp_tart_cherry_a_Pp4_03565023View
7Sweet Cherry-AxS-F14N/A32.5RosBREED_snp_tart_cherry_a_Pp4_03565023View
8Sweet Cherry-RL-Lapins-2013LG04N/A10.2ss490548462View
9Sweet Cherry-RL-F1-2013LG04N/A10.1ss490548462View
Alignments
Feature NameTypeLocationAnalysis
scaffold_4 supercontig scaffold_4:3565023..3565023. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp04 chromosome Pp04:3565078..3565078. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr4 chromosome PAV_r1.0chr4:4521888..4521888. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)