RosBREED_snp_tart_cherry_f_Pp1_09679741, RosBREED_snp_tart_cherry_f_Pp1_09679741 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_09679741
dbSNP IDss490546014
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_09679741
TypeSNP
SNP AllelesA/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A13.69RosBREED_snp_tart_cherry_f_Pp1_09679741View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A44.66RosBREED_snp_tart_cherry_f_Pp1_09679741View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_09679741 ID=RosBREED_snp_tart_cherry_f_Pp1_09679741; Name=RosBREED_snp_tart_cherry_f_Pp1_09679741; organism=Prunus cerasus; type=genetic_marker; length=207bp
CTCATTTCAATTTTGCAATTTAGTTCTATATGGATAAGGATGCATATACA
GATATAATGGTGTCTGAAGTGACATCATTAGGGCCCTAATTGATTCAACT
C[A/C]TTATTAATTAACAGACAACTTGAACTCTAGTGACGATTTTAATT
TCATTGGTGTTATCTAAATCTTTTGGTAGTGAACTGAATGATGATTTTTT
TTTTATA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:9679741..9679741. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:10129099..10129099. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:9057506..9057506. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)