RosBREED_snp_tart_cherry_a_Pp1_01897160, RosBREED_snp_tart_cherry_a_Pp1_01897160 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_01897160
dbSNP IDss490545731
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_01897160
TypeSNP
SNP AllelesT/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A3.49RosBREED_snp_tart_cherry_a_Pp1_01897160View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A6.47RosBREED_snp_tart_cherry_a_Pp1_01897160View
3SourCherry-25x25-F1LG1N/A7.55RosBREED_snp_tart_cherry_a_Pp1_01897160View
4Sour Cherry-US-F1LG1N/A7.55RosBREED_snp_tart_cherry_a_Pp1_01897160View
5SourCherry-RE-F1LG1N/A7.55RosBREED_snp_tart_cherry_a_Pp1_01897160View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_01897160 ID=RosBREED_snp_tart_cherry_a_Pp1_01897160; Name=RosBREED_snp_tart_cherry_a_Pp1_01897160; organism=Prunus cerasus; type=genetic_marker; length=207bp
TAAATAGAAGCACTCATTTATTTTGACAGTGAAAGTGTTCTCTGAGCTTG
TACCATAGAAATGGCATTAAAACTGCAAGAGAATTGGAATAAAAGAAATC
T[T/G]GAGGTTATGCCATAAACTACACCATTTTCAATAAACCGTGAGCT
ATTAAGGGAGTTGGAAGAATCAGCAGACTAGCTCAATCCTCAATAGAAGA
GTTAGAT
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:1897160..1897160. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:1897017..1897017. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:1961937..1961937. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)