RosBREED_snp_tart_cherry_f_Pp1_10061954, RosBREED_snp_tart_cherry_f_Pp1_10061954 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_10061954
dbSNP IDss490546022
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_10061954
TypeSNP
SNP AllelesA/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A13.9RosBREED_snp_tart_cherry_f_Pp1_10061954View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A46.75RosBREED_snp_tart_cherry_f_Pp1_10061954View
3Sour Cherry-M172x25-F1LG1N/A31.53RosBREED_snp_tart_cherry_f_Pp1_10061954View
4SourCherry-Montx25-F1LG1N/A31.53RosBREED_snp_tart_cherry_f_Pp1_10061954View
5SourCherry-25x25-F1LG1N/A31.53RosBREED_snp_tart_cherry_f_Pp1_10061954View
6Sour Cherry-US-F1LG1N/A31.53RosBREED_snp_tart_cherry_f_Pp1_10061954View
7SourCherry-RE-F1LG1N/A31.53RosBREED_snp_tart_cherry_f_Pp1_10061954View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_10061954 ID=RosBREED_snp_tart_cherry_f_Pp1_10061954; Name=RosBREED_snp_tart_cherry_f_Pp1_10061954; organism=Prunus cerasus; type=genetic_marker; length=207bp
TGTGAAGTTCAGAAGTCCCCATACAAGTTCCATATTTTCACTTCACCCAA
CAAAGAAAAATGAGAGCTTTCTGATAAAGAGCCAAGTTTAGAGACACAAT
T[A/C]ATTTGAAAGACTGAAATTCATACCCAAGGTTCACAGCCCGTAGA
AGTGATATTAGATATACAAGTTAAGCACAAGAAAATGTTAAGCAAGCGGT
TTGCAAG
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:10061954..10061954. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:10511312..10511312. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:8605606..8605606. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)