RosBREED_snp_tart_cherry_f_Pp1_05866235, RosBREED_snp_tart_cherry_f_Pp1_05866235 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_05866235
dbSNP IDss490545877
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_05866235
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A9.58RosBREED_snp_tart_cherry_f_Pp1_05866235View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A25.94RosBREED_snp_tart_cherry_f_Pp1_05866235View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_05866235 ID=RosBREED_snp_tart_cherry_f_Pp1_05866235; Name=RosBREED_snp_tart_cherry_f_Pp1_05866235; organism=Prunus cerasus; type=genetic_marker; length=207bp
GTCACACGATAGTAATTAGCTAACAACGTGATTCTTTCTCTGATACAAGT
ATAGGAGAAGAATTACTAGGACAATATGTTATGCTGCTGTCAAGAGGCAA
C[T/C]ATCCCTCCCTATTGATAGGTATTGCCTATAAAACTACTCACTAG
CTAGCCCAACACAACACTTTAATTTGTCGAAACTCAAACATCAAAAAAGA
AAATATA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:5866235..5866235. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:6315596..6315596. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:4771515..4771515. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)