RosBREED_snp_tart_cherry_a_Pp1_22622434, RosBREED_snp_tart_cherry_a_Pp1_22622434 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_22622434
dbSNP IDss490546201
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_22622434
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A30.71RosBREED_snp_tart_cherry_a_Pp1_22622434View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A82.21RosBREED_snp_tart_cherry_a_Pp1_22622434View
3Sweet Cherry-C-F1LG1N/A47.14RosBREED_snp_tart_cherry_a_Pp1_22622434View
4Sweet Cherry-VxC-F1LG1N/A64.13RosBREED_snp_tart_cherry_a_Pp1_22622434View
5Sweet Cherry-CxC-F2LG1N/A44.84RosBREED_snp_tart_cherry_a_Pp1_22622434View
6Sweet Cherry-BCxBC-F2LG1N/A54.27RosBREED_snp_tart_cherry_a_Pp1_22622434View
7Sweet Cherry-C-F1-6+9K_array1N/A50.05RosBREED_snp_tart_cherry_a_Pp1_22622434View
8Sweet Cherry-VxC-F1-6+9K_array1N/A81.38RosBREED_snp_tart_cherry_a_Pp1_22622434View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_22622434 ID=RosBREED_snp_tart_cherry_a_Pp1_22622434; Name=RosBREED_snp_tart_cherry_a_Pp1_22622434; organism=Prunus cerasus; type=genetic_marker; length=207bp
TCTCTCTCTATTGGCTTTGTAGCAGCAGAGCTTCAATCCACTGCGTGCTT
CTTCTCCCTTTCTCGATCTCCCTCCCTCCCCTACTTCGTCACTTTTCGAC
C[A/G]TTCCATGGCGGAAGGCAAGCTCGATCTGCCTGACGATCTCCTCT
TGTCCAAACCGTCCGATCAGTCCTGGACCTCCAAAGGTACTTCTGCGCTT
TCATTTT
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:22622434..22622434. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:23596738..23596738. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:17907109..17907109. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)