RosBREED_snp_tart_cherry_a_Pp1_02545938, RosBREED_snp_tart_cherry_a_Pp1_02545938 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_02545938
dbSNP IDss490545755
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_02545938
TypeSNP
SNP AllelesT/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A4.82RosBREED_snp_tart_cherry_a_Pp1_02545938View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A9.65RosBREED_snp_tart_cherry_a_Pp1_02545938View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_02545938 ID=RosBREED_snp_tart_cherry_a_Pp1_02545938; Name=RosBREED_snp_tart_cherry_a_Pp1_02545938; organism=Prunus cerasus; type=genetic_marker; length=207bp
ACGAGCAGATGAGAGGGAGGGAACTGGTGCCCAATTAAGTATCCCAACCA
TTGATCTTCAAGGCATGACTGAGCACTAGAATCTTCCTTTATATCAAATA
T[T/G]ATATATTATTGTACCAGATACTACTGGGGTAGGCAGTTACTTTC
TGAATTATGAGTTGATTAACCCTTGCTTTCTAGAACTTCAACCAAATTAC
TATTCGA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:2545938..2545938. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:2545736..2545736. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:2600905..2600905. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)