RosBREED_snp_tart_cherry_a_Pp1_10531094, RosBREED_snp_tart_cherry_a_Pp1_10531094 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_10531094
dbSNP IDss490546057
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_10531094
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A14.15RosBREED_snp_tart_cherry_a_Pp1_10531094View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A54.51RosBREED_snp_tart_cherry_a_Pp1_10531094View
3SourCherry-Montx25-F1LG1N/A33.66RosBREED_snp_tart_cherry_a_Pp1_10531094View
4SourCherry-25x25-F1LG1N/A33.66RosBREED_snp_tart_cherry_a_Pp1_10531094View
5Sour Cherry-US-F1LG1N/A33.66RosBREED_snp_tart_cherry_a_Pp1_10531094View
6SourCherry-RE-F1LG1N/A33.66RosBREED_snp_tart_cherry_a_Pp1_10531094View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_10531094 ID=RosBREED_snp_tart_cherry_a_Pp1_10531094; Name=RosBREED_snp_tart_cherry_a_Pp1_10531094; organism=Prunus cerasus; type=genetic_marker; length=207bp
GTTAAGTATTCAGCATCTCATCAAAAATGGCATTGGAGAAGCCCCATCAC
TGAAGAACACCTTGTCCTTTCAAACCCTCCCCATCCCCACCCCCTTTCTC
T[A/G]TTTAATTTGATGAGGTAAGGGGGTGATTTTTGAAGCAAGTGGGA
AAAACATAAAGCAGAAATTATTACCCTTTTCTCTTACTGATGTTACACTC
CATGTTG
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:10531094..10531094. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:10979081..10979081. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:8614041..8614041. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)