RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1, RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1
dbSNP IDss475878460
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1
50K SNP array for apple:AX-105195212
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAACTCCACATTCAAATCCAACTTCCCCAATGCAGC
3' Flanking SequenceGCACTTCTTTTTCTTGCACCAGAAGTTGACTTCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A67.3RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1View
2Apple-M432-2013-physical-Malus-domestica5N/A34473516RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1View
Sequence
>RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1 ID=RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1; Name=RosBREEDSNP_SNP_GA_34473516_Lg5_RosCOS2737_MAF40_1636172_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
AACTCCACATTCAAATCCAACTTCCCCAATGCAGCRGCACTTCTTTTTCT
TGCACCAGAAGTTGACTTCT
Alignments
Feature NameTypeLocationAnalysis
MDC005244.618 contig MDC005244.618:6853..6853. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:7357567..7357567. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation